Table 1.

TCRs sharing perfectly matched TRA chains between IAR and PIT T cells. ^A

	TRA chain			TRB chain
Cells	V gene	Junction	J gene	V gene	Junction	J gene
IAR	TRAV1-2	CAVRMNTGFQKLVF	TRAJ8	TRBV11-2	CASSFGGGATDTQYF	TRBJ2-3
PIT	TRAV1-2	CAVRMNTGFQKLVF	TRAJ8	TRBV9 B	CASSVGMDPGLGYNEQFF	TRBJ2-1
IAR	TRAV12-1	CVVNDQAGTALIF	TRAJ15	TRBV7-2	CASSLDAGRNSPLHF	TRBJ1-6
PIT	TRAV12-1	CVVNDQAGTALIF	TRAJ15	TRBV20-1	CSARGYNSYEQYF	TRBJ2-7
IAR	TRAV12-1	CVVQGGSYIPTF	TRAJ6	TRBV5-4	CASSLVTSGENEQFF	TRBJ2-1
PIT	TRAV12-1	CVVQGGSYIPTF	TRAJ6	ND C
IAR	TRAV12-2	CAVNQAGTALIF	TRAJ15	TRBV28	CASSFGSGADYGYTF	TRBJ1-2
PIT	TRAV12-2	CAVNQAGTALIF	TRAJ15	TRBV29-1	CSVFDWDRGPGELFF	TRBJ2-2
IAR	TRAV12-2	CAVRSNFGNEKLTF	TRAJ48	TRBV19	CASGTDSY-EQYF	TRBJ2-7
PIT	TRAV12-2	CAVRSNFGNEKLTF	TRAJ48	TRBV28	CASRTTGGTEAFF	TRBJ1-1
IAR	TRAV13-1	CAASIGTGTASKLTF	TRAJ44	TRBV9	CASSVA-GGGY-EQYF	TRBJ2-7
PIT	TRAV13-1	CAASIGTGTASKLTF	TRAJ44	TRBV24-1	CATSDPSGGGGNEQFF	TRBJ2-1
IAR	TRAV41	CAASNTGNQFYF	TRAJ49	TRBV28	CAIGGRVYNEQFF	TRBJ2-1
PIT	TRAV41	CAASNTGNQFYF	TRAJ49	TRBV5-1	CASSGSNYGYT-F	TRBJ1-2
IAR	TRAV5	CAERGLTGGGNKLTF	TRAJ10	TRBV9	CASSVGGDFYNEQFF	TRBJ2-1
PIT	TRAV5	CAERGLTGGGNKLTF	TRAJ10	TRBV12-5	CASGLTRGSTDTQYF	TRBJ2-3
IAR	TRAV8-2	CVVSGGSNYKLTF	TRAJ53	TRBV29-1	CSAHGGGGT-EAFF	TRBJ1-1
PIT	TRAV8-2	CVVSGGSNYKLTF	TRAJ53	TRBV6-1	CASSQGTPQYNEQFF	TRBJ2-1
IAR	TRAV8-3	CAVGPTGTASKLTF	TRAJ44	TRBV7-6	CASSTNHQ------ETQYF	TRBJ2-5
PIT	TRAV8-3	CAVGPTGTASKLTF	TRAJ44	TRBV3-1	CASSGTGTGGLSPQETQYF	TRBJ2-5

^AShown are amino acid sequence comparisons of unique IAR and PIT T cell TCRs. Dashes indicate gaps.

^BBold font indicates a mismatch with the IAR reference sequence (top row of each pair).

^CND, not determined