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(A) Tasks of the 2 main Reads2Map workflows: EmpiricalReads2Map and SimulatedReads2Map. (B) Tools to run the workflows on the Cloud [35] or in high-performance computing (HPC) environments. (C) The Reads2Map shiny app has as input the outputs of the workflows. It builds several descriptive graphics to evaluate the best upstream software combination for linkage map construction.
