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. 2023 Oct 27;23:519. doi: 10.1186/s12870-023-04543-x

Table 2.

Genes of interest that may be involved in the regulation of flower / seed development

Gene ID FDR Log2FC Annotation
Glyma.04G180300 2.92E-258 6.12 At2g26730
Glycine_max_newGene_3783 3.06E-227 5.89 L9
Glyma.03G054100 2.94E-113 4.52 SS
Glyma.03G053500 1.41E-80 3.99 SS
Glyma.02G302200 4.52E-48 2.73 ABCG26
Glyma.11G097900 5.62E-40 2.63 PKSB
Glyma.07G043300 1.89E-31 2.43 CYP704B1
Glyma.01G073600 1.12E-74 2.41 PKSA
Glyma.14G012000 1.56E-26 2.16 ABCG26
Glyma.08G332100 1.48E-20 2.16 ABCG26
Glyma.15G018500 9.43E-37 2.09 TKPR
Glyma.09G104800 3.06E-19 2.08 FAR2
Glyma.06G184400 3.94E-19 2.08 BRI
Glyma.19G161100 6.50E-120 1.80 AUX28
Glyma.20G210400 3.57E-45 1.33 IAA14
Glyma.10G240500 2.29E-07 1.24 AGL42
Glyma.11G252300 1.59E-06 1.14 MTF1
Glyma.15G058000 4.71E-15 1.06 JOINTLESS
Glyma.13G223300 5.56E-09 1.04 AGAMOUS
Glyma.07G081300 1.71E-06 1.02 MADS3

Except for gene Glycine_max_newGene_3783, the character "glyma.Wm82.gnm2." are omitted before other gene IDs. FDR, false discovery rate; FC, fold change: FPKM of triple mutants divided by FPKM of control; At2g26730, inactive receptor kinase At2g26730; L9, 50S ribosomal protein L9; SS, Sucrose synthase; ABCG26, ABC transporter G family member 26; PKSB, Type III polyketide synthase B; CYP704B1, Cytochrome P450 704B1; PKSA, Type III polyketide synthase A; TKPR, Tetraketide alpha-pyrone reductase; FAR2, Fatty acyl-CoA reductase 2; BRI, Brassinosteroid Insensitive 1; AUX28, Auxin-induced protein AUX28; IAA14, Auxin-responsive protein IAA14; AGL42, MADS-box protein AGL42; MTF1, MADS-box transcription factor 1; JOINTLESS, MADS-box protein JOINTLESS; AGAMOUS, Floral homeotic protein AGAMOUS; MADS3, Agamous-like MADS-box protein MADS3. The complete annotations for each DEG are listed in Table S4