| N | Number of protocells in the compartment (no unit) |
| N0 | Initial number of cells |
| F | Concentration in food molecules in the compartment (mmol·L−1) |
| F0 | Initial concentration of food in the compartment |
| A1, A2, A3, A4 | Concentrations in molecules A1, A2, A3 and A4 in one protocell (mmol·m−3) |
| A1,C, A2,C, A3,C, A4,C | Concentrations in molecules A1, A2, A3 and A4 in the compartment (mmol·m−3) |
| Fi | Food input rate in the compartment (mmol·m−3·s−1) |
| P | Environmental parameter (no unit) |
| Pt | Period of P oscillations (s) |
| Pa | Amplitude of P oscillations (no unit) |
| Df | Constant for food diffusion between protocells and the environment (mmol·s−1·m−2) |
| V | Volume of a protocell (m3) |
| D | Constant for diffusion of molecules A1, …, A4 between protocells and the environment (m·s−1) |
| U1, U2, U3, U4 | Rates of active intake molecules A1, …, A4 by protocells (mmol·s−1·m−2) |
| fm | Constant for the food required for protocell maintenance (mmol·m−3·s−1) |
| fu | Constant for the food required for active intake of molecules A1, …, A4 (m2) |
| Gr | Constant for protocell growth ((m3·mmol−1)3) |
| L | Constant for protocell death probability (mmol−1) |
| S | Standard deviation of the distribution of change of U1, …, U4 between generations (mmol·s−1·m−2) |