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. 2023 Oct 5;11(10):2499. doi: 10.3390/microorganisms11102499

Figure 1.

Figure 1

Multidimensional scaling of RF distances between UFBoot samples and reference topologies. The relative distances between tree topologies within each RSAP informs how sampled trees obtained from a RSAP are consistently similar (e.g., RSAP8 and RSAP9) or dissimilar (RSAP1 and RSAP12) to the overall topology. One hundred trees were randomly chosen from each UFBoot sample. The RF distances between each set of trees, as well as the phylogeny published by Hug et al. [10] was then calculated.