Table 1.
Lineage identification of Burkholderia mallei BAC 86/19 based on a scheme previously described (Girault et al., 2018 [27]).
| Lineage | Genomic Position * | Reference Base to Be Called a Lineage ** |
Base in B. mallei BAC 86/19 |
|---|---|---|---|
| L1 | 330,697 | C | T |
| L2 | 2,621,027 | A | G |
| L2B1 | 354,181 | A | G |
| L2B2 | 1,408,904 | C | T |
| L2B2sB1 | 1,853,849 | T | C |
| L2B2sB1Gp1 | 1,163,826 | T | C |
| L2B2sB1Gp2 | 559,637 | G | A |
| L2B2sB2 | 707,292 | T | C |
| L3 | 2,557,840 | T | T |
| L3B1 | 309,945 | T | C |
| L3B2 *** | 1,767,871 | A | A |
| L3B3 | 135,971 | T | C |
| L3B3sB1 | 155,657 | T | C |
| L3B3sB2 | 1,560,255 | A | G |
| L3B3sB3 | 922,706 | T | C |
* Genomic position according to the reference genome of B. mallei ATCC 23344. ** Base that should be present in a particular genomic region for an isolate to be defined as the corresponding lineage. *** B. mallei BAC 86/19 is identified as lineage 3, sublineage 2.