TABLE 2.

Genes induced or repressed by SeV infection in various cell lines^a

Encoded protein	Unigene ID	Symbol	Effect of SeV infection in:
			2fTGH	U4C	2F-SR	P2.1	U4C.2
2′-5′-oligoadenylate synthetase 2 (69-71 kDa)	Hs.414332	OAS2	I	U	U	R	U
Activating transcription factor 3	Hs.460	ATF3	I	I	U	I	I
Apoptosis inhibitor	Hs.75263	cIAP1	I	I	U	I	U
Apoptosis inhibitor 2	Hs.127799	cIAP2	I	I	U	U	U
Bcl-2 binding component 3	Hs.87246	BBC3 (PUMA)	I	I	U	U	I
Chemokine (C-X-C motif) ligand 10	Hs.2248	IP-10 (CXCL10)	I	I	U	I	I
Colony-stimulating factor 1 (macrophage)	Hs.173894	CSF1	I	I	U	I	I
Fibroblast growth factor 2 (basic)	Hs.284244	FGF2	I	U	I	U	U
Fucosyltransferase 2	Hs.292999	FUT2	I	I	I	I	I
General transcription factor IIF, polypeptide 1	Hs.68257	GTF2F1	I	U	U	U	U
GTP cyclohydrolase 1 (dopa-responsive dystonia)	Hs.86724	GCH1	I	U	U	U	U
IFN-induced protein with tetratricopeptide repeats 1	Hs.20315	ISG56	I	I	I	U	I
IFN-induced protein with tetratricopeptide repeats 2	Hs.293797	ISG54	I	I	I	U	I
IFN-induced protein with tetratricopeptide repeats 4	Hs.181874	ISG60	I	U	U	U	U
Inhibin, beta A (activin A, activin AB alpha polypeptide)	Hs.727	INHBA	I	I	U	U	U
Inhibitor of kappa B alpha	Hs.81328	IκBα	I	I	U	I	I
Interferon regulatory factor 1	Hs.80645	IRF-1	I	I	U	U	U
Interferon regulatory factor 2	Hs.83795	IRF-2	I	U	U	U	U
Interferon, alpha-inducible protein (clone IFI-15K)	Hs.833	ISG15	I	I	I	U	I
Interleukin 6	Hs.93913	IL-6	I	I	U	U	I
Interleukin 8	Hs.624	IL-8	I	I	U	I	I
Jun B proto-oncogene	Hs.515157	JUNB	I	I	U	I	U
Macrophage inflammatory protein I alpha	Hs.73817	MIP1α (CCL3)	I	I	U	I	I
Mannose-binding lectin (protein C) 2	Hs.2314	MBL2	I	I	R	I	I
MHC class I, A	Hs.181244	HLA-A	I	U	I	U	I
MHC class I, C	Hs.277477	HLA-C	I	U	U	I	I
MHC class I, F	Hs.110309	HLA-F	I	U	U	U	I
MHC class I, G	Hs.73885	HLA-G	I	U	U	U	I
Monocyte chemotactic protein 1	Hs.303649	MCP1 (CCL2)	I	U	U	U	U
Natural killer cell transcript 4	Hs.943	NK4	I	U	U	U	I
Nexin, plasminogen activator inhibitor type 1	Hs.82085	PAI1 (SERPINE1)	I	I	I	I	I
NF-κB p105	Hs.83428	NF-κB1	I	I	U	I	I
Nuclear factor (erythroid-derived 2)-like 3	Hs.22900	NFE21.3 (NRF3)	I	I	U	I	U
Nucleoside phosphorylase	Hs.75514	NP	I	U	I	U	I
Phorbol-12-myristate-13-acetate-induced protein 1	Hs.96	NOXA (PMAIP1)	I	I	I	I	I
Protein tyrosine phosphatase, nonreceptor type 11	Hs.83572	PTPN11 (SHP2)	I	I	U	U	I
Protein tyrosine phosphatase, receptor type kappa	Hs.79005	PTPRK	I	U	U	U	U
Short stature homeobox	Hs.105932	SHOX	I	U	U	U	I
Similar to S. cerevisiae SSM4	Hs.380875	TEB4	I	I	I	I	U
Stanniocalcin	Hs.25590	STC1	I	I	I	U	U
Syndecan 4 (amphiglycan, ryudocan)	Hs.252189	SDC4	I	I	U	I	I
Tight junction protein 2 (zona occludens 2)	Hs.75608	TJP2	I	I	I	I	I
TNF receptor-associated factor 1	Hs.2134	TRAF1	I	I	R	U	U
Transcription factor AP-2 gamma	Hs.61796	ERF1 (TFAP2C)	I	U	U	I	U
Tumor necrosis factor alpha-induced protein 3	Hs.211600	TNFAIP3 (A20)	I	I	U	I	I
UDP-N-acetyl-alpha-d-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	Hs.130181	GALNT2	I	U	I	U	U
Vascular endothelial growth factor C	Hs.79141	VEGFC	I	I	I	U	U
Viperin	Hs.17518	CIG5	I	U	I	U	I
Zinc finger CCCH type, antiviral 1	Hs.35254	ZC3HAV1	I	I	I	U	U

^aI, induced; U, unchanged; R, repressed.