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. 2005 Mar;25(6):2085–2094. doi: 10.1128/MCB.25.6.2085-2094.2005

TABLE 2.

Frequencies of SB integration events within intragenic regions of human cellsa

Genomic location % of integrationsb
Random SBc ASVd MLVde HIV-1df ASLVg
In RefSeq genes 33.2 39.1h 53.0h 50.7h 83.4h 38.2h
5 kb upstream of genes 2.9 3.8 5.1h 13.0h 3.4 ND
±5 kb from transcription start site 5.4 8.5h 8.9h 21.4h 11.4h ND
±5 kb from CpG islands 8.3 11.2h ND ND ND ND
±1 kb from CpG islands 1.9 2.5 2.8 15.2h 1.9 3.2
a

Compared with integration frequencies of ASV, MLV, HIV-1, and ASLV. Results from the present study are boldfaced.

b

Values shown for ASV, MLV, HIV-1, and ASLV represent the expected integration frequencies for each vector after the values originally reported were normalized according to the random integration frequencies shown. ND, not determined.

c

SB integrations were compared to 10,000 computer-simulated random integrations and analyzed by using a χ2 test for statistical significance.

d

Adjusted values from the work of Narezkina et al. (41).

e

Adjusted values from the work of Wu et al. (58).

f

Adjusted values from the work of Schröder et al. (50).

g

Adjusted values from the work of Mitchell et al. (36).

h

Values are distinguishable from those for random integration (P ≤ 0.03).