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. 2023 Jul 19;228(9):1263–1273. doi: 10.1093/infdis/jiad270

Table 3.

Amino Acid Substitutions in Nsp12 Detected Postbaseline

Participants, No. (% out of Participants With Baseline and Postbaseline Sequencing Data Available)a
Mild/Moderate Disease Severe Disease Any Disease Severity Total
RDV Placebo RDV Placebo RDV Placebo
Participants with baseline and postbaseline sequencing datab 4 2 27 28 31 30 61
No substitution 2 (50.0) 1 (50.0) 17 (63.0) 18 (64.3) 19 (61.3) 18 (60.0) 37 (60.7)
Any substitution 2 (50.0) 1 (50.0) 10 (37.0) 10 (35.7) 12 (38.7) 12 (40.0) 24 (39.3)
 A16V 1 (25.0) 0 0 0 1 (3.2) 0 1 (1.6)
 T20T/1 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 G44G/V 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 F56F/S 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 K59K/N 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 D60D/H 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 A97A/S 0 1 (50.0) 0 0 0 1 (3.3) 1 (1.6)
 A125A/T 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 A176A/V 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 P227P/Lc 1 (25.0) 0 0 1 (3.6) 1 (3.2) 1 (3.3) 2 (3.3)
 D291D/N 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 A311A/E 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 A311A/T 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 V315V/F 0 1 (50.0) 0 0 0 1 (3.3) 1 (1.6)
 P323P/L 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 T324T/I 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 G345G/V 0 1 (50.0) 0 0 0 1 (3.3) 1 (1.6)
 V359V/I 0 0 1 (3.7)d 0 1 (3.2)d 0 1 (1.6)
 A382A/V 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 N403N/I 0 1 (50.0) 0 0 0 1 (3.3) 1 (1.6)
 A423A/V 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 S425S/P 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 G427G/V 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 Q444Q/H 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 Y483Y/H 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 S501L 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 Q524Q/* 1 (25.0) 0 0 0 1 (3.2) 0 1 (1.6)
 T567T/I 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 D684D/N 1 (25.0) 0 0 0 1 (3.2) 0 1 (1.6)
 T701T/M 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 L707L/F 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 Y719Y/C 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 R733R/I 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 V764V/L 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 A771A/P 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 V792I 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 C799C/F 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 G823G/C 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)
 P830P/S 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 P832P/S 0 0 0 1 (3.6) 0 1 (3.3) 1 (1.6)
 F843F/L 0 0 1 (3.7) 0 1 (3.2) 0 1 (1.6)

Abbreviations: RDV, remdesivir; SpO2, peripheral oxygen saturation.

aSevere disease was defined as requiring mechanical ventilation, requiring oxygen, SpO2 ≤94% on room air, or tachypnea (respiratory rate ≥24 breaths/minute). Mild/moderate disease was defined as having SpO2 >94% and respiratory rate <24 breaths/minute without supplemental oxygen.

bThis table lists Nsp12 substitutions emerged in the RDV and placebo arms with >80th percentile of cumulative viral shedding and <20th percentile of cumulative viral shedding.

cP227L was observed as a full mutant in 1 participant in the placebo arm and as a mixture with wild type in 1 participant in the RDV arm.

dIn the RDV arm, V359V/I and L707L/F were observed in 1 participant with <20th percentile of cumulative viral shedding. The other substitutions in the RDV arm were observed in participants with >80th percentile of cumulative viral shedding.