Table 1. Genome data for Acronicta leporina, ilAcrLepo1.1.
| Project accession data | ||
|---|---|---|
| Assembly identifier | ilAcrLepo1.1 | |
| Species | Acronicta leporina | |
| Specimen | ilAcrLepo1 | |
| NCBI taxonomy ID | 987862 | |
| BioProject | PRJEB56406 | |
| BioSample ID | SAMEA10979192 | |
| Isolate information | female, thorax (PacBio sequencing), head (Hi-C sequencing) | |
| Assembly metrics * | Benchmark | |
| Consensus quality (QV) | 66.4 | ≥ 50 |
| k-mer completeness | 100% | ≥ 95% |
| BUSCO ** | C:99.1%[S:98.8%,D:0.3%],
F:0.2%,M:0.7%,n:5286 |
C ≥ 95% |
| Percentage of assembly
mapped to chromosomes |
99.98% | ≥ 95% |
| Sex chromosomes | ZW | localised homologous pairs |
| Organelles | Mitochondrial genome assembled | complete single alleles |
| Raw data accessions | ||
| PacificBiosciences SEQUEL II | ERR10357391 | |
| Hi-C Illumina | ERR10313053 | |
| Genome assembly | ||
| Assembly accession | GCA_947256265.1 | |
| Accession of alternate haplotype | GCA_947256475.1 | |
| Span (Mb) | 465.6 | |
| Number of contigs | 73 | |
| Contig N50 length (Mb) | 9.3 | |
| Number of scaffolds | 35 | |
| Scaffold N50 length (Mb) | 16.3 | |
| Longest scaffold (Mb) | 20.5 | |
* Assembly metric benchmarks are adapted from column VGP-2020 of “Table 1: Proposed standards and metrics for defining genome assembly quality” from ( Rhie et al., 2021).
** BUSCO scores based on the lepidoptera_odb10 BUSCO set using v5.3.2. C = complete [S = single copy, D = duplicated], F = fragmented, M = missing, n = number of orthologues in comparison. A full set of BUSCO scores is available at https://blobtoolkit.genomehubs.org/view/ilAcrLepo1.1/dataset/CAMYGR01/busco.