Table 4.
Predicted CRISPR–Cas systems in different Chryseobacterium genomes
|
Species |
No. of CRISPR |
CRISPR type |
No. of Cas genes |
Cas gene |
No. of spacers |
Spacer match |
|---|---|---|---|---|---|---|
|
C. cucumeris GSE06 |
1 |
III-A |
– |
– |
2 |
nd* |
|
C. hispalense DSM 25574 |
5 |
I-G, III-B, III-D |
– |
– |
5 |
nd |
|
C. indologenes PgBE177 |
4 |
II-A |
– |
– |
6 |
nd |
|
C. oleae DSM 25575 |
13 |
I-B, II-C |
1 |
cas1_TypeII, cas2_TypeI-II-III, cas9_TypeII |
21 |
|
|
C. phosphatilyticum ISE14 |
2 |
I-A, VI-B |
– |
– |
8 |
nd |
|
C. salivictor NBC122 |
8 |
II-C |
3 |
cas1_TypeII, cas2_TypeI-II-III, cas9_TypeII |
34 |
Buttiauxella sp., Cafeteria roenbergensis virus, Candidatus Enterovibrio luxaltus, Plesiomonas shigelloides, Pseudocowpox virus, Vibrio vulnificus |
|
Chryseobacterium sp. T16E-39 |
3 |
I-B |
– |
– |
11 |
Vibrio aquimaris |
*Not determined