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. 2023 Oct 31;42(10):113305. doi: 10.1016/j.celrep.2023.113305
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Chicken anti-GFP Abcam Cat#ab13970; RRID: AB_300798
Guinea pig anti-(Arg8)-vasopressin Peninsula Laboratories Cat#T5048;
RRID: AB_518680
Mouse anti-OT-neurophysin Dr. Harold Gainer PS38
Rabbit anti-C-CASP3 (Asp175) Cell Signaling Cat#9661;
RRID: AB_2341188
Rabbit anti-c-fos Synaptic Systems Cat#226003;
RRID: AB_2891278
Rabbit anti-dsRed (Living Colors®) Takara Bio Cat#632496;
RRID: AB_10013483
Alexa Fluor 405 goat anti-mouse IgG Invitrogen Cat#A31553
Alexa Fluor 488 goat anti-chicken IgG Invitrogen Cat#A11039
Alexa Fluor 568 donkey anti-rabbit IgG Invitrogen Cat#A10042
Alexa Fluor 647 donkey anti-goat IgG Invitrogen Cat#A21447
Alexa Fluor 647 donkey anti-rabbit IgG Invitrogen Cat#A31573
Alexa Fluor 647 donkey anti-sheep IgG Invitrogen Cat#A21448

Chemicals, peptides, and recombinant proteins

4′, 6-Diamidino-2-phenylindol (DAPI) Thermo Fisher Cat#1306;
CAS No. 28718-90-3
6-Cyano-7-nitroquinoxaline-2,3-dione (CNQX) Sigma-Aldrich Cat#C239;
CAS No. 115066-14-3
A-71623 (CCKAR agonist) Tocris Cat#2411/1;
Cas No. 130408-77-4
Bovine serum albumin Sigma-Aldrich Cat#A8806;
CAS No. 9048-46-8
Calbiochem® Phosphatase and Protease Inhibitors Merck Millipore Cat#134544
Cholecystokinin octapeptide, sulfated Tocris Cat#1166;
CAS No. 25126-32-3
Clozapine-N-oxide Enzo Cat#BML-NS105-0025;
CAS No. 34233-69-7
D-(−)-2-Amino-5-phosphonopentanoic acid (D-AP5) Tocris Cat#0106;
CAS No. 79055-68-8
Deoxycholate Thermo Fisher Cat#89005;
CAS No. 302-95-4
Dibenzyl ether (DBE) Sigma-Aldrich Cat#33630;
CAS No. 103-50-4
Dimethyl sulfoxide (DMSO) Sigma-Aldrich Cat#276855;
CAS No. 67-68-5
DL-Dithiothreitol (DTT) Sigma-Aldrich Cat#D8255;
CAS No. 578517
Fluorogold Santa Cruz Cat#sc-358883;
CAS No. 223769-64-0
Gelatin from porcine skin (SUMI) VWR International Cat#SAFSG1890;
CAS No. 9000-70-8
Glycine Sigma-Aldrich Cat#G7126;
CAS No. 56-40-6
Heparin sodium Sigma-Aldrich Cat#H0200000;
CAS No. 904108-1
IPEGAL CR-630 Sigma-Aldrich Cat#18896;
CAS No. 9002-93-1
Methanol Sigma-Aldrich Cat#322415;
CAS No. 67-56-1
Mowiol® 4-88 Merck Milllipore Cat#81381-250G;
CAS No. 81381
NeuroTrace™ 435/455 Thermo Fisher Cat#N21479
Nonidet™ P40 substitute Sigma-Aldrich Cat#74385;
CAS No. 9016-45-9
Paraformaldehyde Carl Roth Cat#0335.2;
CAS No. 30525-89-4
Picrotoxin Sigma-Aldrich Cat#P1675;
CAS No. 124-87-8
Pierce™ Horsereadish peroxidase Thermo Fisher Cat#31490;
CAS No. 9003-99-3
Potassium chloride (KCl) Sigma-Aldrich Cat#P3911-25G;
CAS No. 7447-40-7
Primers Thermo Fisher N/A
RNasin Plus RNase inhibitor Takara Clontech Cat#2313A
Spermidine Sigma-Aldrich Cat#85553;
CAS No. 124-20-9
Spermine Sigma-Aldrich Cat#S3256;
CAS No. 71-44-3
SuperAsein RNase Inhibitor Thermo Fisher Cat#AM2696
Syntocinon (Oxytocin) Selleckchem Cat#P1902;
CAS No. 50-56-6
Tamoxifen Sigma-Aldrich Cat#T5648;
CAS No. 10540-29-1
TaqMan Gene Expression Assay Thermo Fisher N/A
TaqMan Universal Master Mix II, no UNG Thermo Fisher Cat#4440040
Triton X-100 Roche Diagnostics Cat#11858620;
CAS No.9036-19-5
Tween 20 Sigma-Aldrich Cat#P1379;
CAS No. 9005-64-5

Critical commercial assays

Agilent RNA 6000 Pico Kit Agilent Technologies Cat#5067-1513
Quant-IT RiboGreen Kit Thermo Fisher Cat#Q33210
RNeasy Micro Kit QUIAGEN Cat#74004
RNeasy Mini Kit QUIAGEN Cat#74104
SMART-Seq® v4 Ultra® Low Input RNA Kit TaKaRa Cat#6344893
SMARTer® PCR cDNA synthesis kit TaKaRa Cat#634455
Tetramethyl benzidine substrate (TMB) BioLegend Cat#421101

Deposited data

snRNA-seq2 (raw data; GEO - NCBI) This paper GSE243448
RiboTag-mRNA-seq (raw data; GEO – NCBI) This paper GSE242245
RiboTag-mRNA-seq and snRNA-seq2 - code (Zenodo) Zenodo https://doi.org/10.5281/zenodo.7673205; https://zenodo.org/record/7673205#.Y_h_bHbMI2x
RiboTag-mRNA-seq and snRNA-seq2 - code (Github) Github https://github.com/viktormiok/snRNAseq_RiboTagRNAseq-oxytocin

Experimental models: Organisms/strains

Ai14 (B6.Cg-Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/J) Jackson Laboratory RRID: IMSR_JAX:007914
CAG-Sun1sfGFP (B6;129-Gt(ROSA)26Sortm5(CAG-Sun1/sfGFP)Nat/J) Jackson Laboratory RRID: IMSR_JAX:021039
Oxtrflox(B6.129(SJL)-Oxtrtm1.1Wsy/J) Jackson Laboratory RRID: IMSR_JAX:008471
Oxytocin-ires-Cre (B6;129S-Oxttm1.1(cre)Dolsn/J) Jackson Laboratory RRID: IMSR_JAX:024234
RiboTag (B6N.129-Rpl22tm1.1Psam/J) Jackson Laboratory RRID: IMSR_JAX:011029
ROSA-DTA (B6.129P2-Gt(ROSA)26Sortm1(DTA)Lky/J) Jackson Laboratory RRID: IMSR_JAX:009669
ROSA.CreERT2(B6.129-Gt(ROSA)26Sortm1(cre/ERT2)Tyj/J) Jackson Laboratory RRID: IMSR_JAX:008463

Oligonucleotides

Cckar (TaqMan probe) Thermo Fisher Mm00438060
Cckbr (TaqMan probe) Thermo Fisher Mm00432329
Hprt (TaqMan probe) Thermo Fisher Mm01545399
Mc4R (TaqMan probe) Thermo Fisher Mm00457486
Ot (TaqMan probe) Thermo Fisher Mm01329577
Otr (TaqMan probe) Thermo Fisher Mm01182684
Sim1 (TaqMan probe) Thermo Fisher Mm00441390

Software and algorithms

FIJI NIH https://ImageJ.net/Fiji/Downloads
FlowJo BD N/A
GraphPad Prism 9.4.1 GraphPad Software N/A
IMARIS ×64 9.1.2 and ×64 9.2 Bitplane, Oxford Instruments N/A
MacLab Chart Pro 7.0 GE Healthcare N/A
RStudio 4.21 Posit, RStudio PBC https://www.rstudio.com/products/rstudio/download/

Other

AAV2/1-DIO-CAG-GCaMP6f (Chen et al.)98 Addgene viral prep #100839
AAV2/1-DIO-hSYN1-hM3Dq-mCherry (Krashes et al.)99 Addgene viral prep #44361
AAV2/1-DIO-hSYN1-mCherry Bryan Roth lab (unpublished) Addgene viral prep #50459
AAV2/1-OTp-iCre Custom made23 N/A
AAV2/1-OTp-Venus Custom made23 N/A
Ketamine (Ketabel) HFW/Bremer Pharma GmBH CAS No. 6740-88-1
Meloxicam WDT/Pharma-Partner-Vetriebs GmBH CAS No. 71125-38-7
Metamizol WDT/Pharma-Partner-Vetriebs GmBH CAS No. 68-89-3