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. Author manuscript; available in PMC: 2023 Nov 11.
Published in final edited form as: J Natl Med Assoc. 2023 Feb 17;115(2):164–174. doi: 10.1016/j.jnma.2023.01.008

Table 1.

Racial frequency of genotypes that influence the pharmacogenetics and therapeutic targets of PDAC. This table demonstrates differences in allele frequencies between African and European ancestral populations and it is impact on enzymatic functional differences. These allele frequencies are associated with common drugs used to treat patients with PDAC and have implications on pharmacogenetics and therapeutic targets during treatment.

Genotype Activity Allelic frequencies (%)
Associated drug class
African ancestry European ancestry
DPD deficient genotypes Decreased
Enzymatic activity
4-12%16, 18, 77 3-5%16, 18, 77 Fluoropyrimidines (5-FU and Capecitabine)
TYMS: 2R/2R expression Decreased TS activity 28%18 23.8%18 Fluoropyrimidines (5-FU and Capecitabine)
MMR deficiency Impaired DNA repair genes 9.6%78 10.4%78 Pembrolizumab
MSI Impaired DNA repair gene 3.6-12%7981 14%79, 80 Pembrolizumab
PALB2 Impaired DNA repair gene 6.6 Median TPM12, 13 5.5 median TPM12, 13 PARP-I
HRD: BRCA 1 mutation Impaired DNA repair gene 3.54%82 2.15% Non-Ashkenazi 5.6% Ashkenazi82 PARP-I, Platinums (Oxaliplatin and Cisplatin)
HRD: BRCA 2 mutation Impaired DNA repair gene 4.55%82 1.50% Non-Ashkenazi; 3.7% Ashkenazi82 PARP-I, Platinums (Oxaliplatin and Cisplatin)
ERCC1 mutation Impaired DNA repair gene 73.5 TPM1 12, 13 63.8 TPM12, 13 Platinums
ERCC2 mutation Impaired DNA repair gene 10.1 TPM12, 13 14.0 TPM12, 13 Platinums
UGT1A1*28 expression Decreased enzymatic activity 13-43%21, 83 8-39%21, 83 Irinotecan
UGT1A1* 93 Decreased enzymatic activity 34%21 27%21 Irinotecan
UGT1A1*6 Decreased enzymatic activity 0.1%21 1%21 Irinotecan
POLA2 2089G>A Gemcitabine resistance during Knockdown 18%27, 32 18%27 Gemcitabine
DCTD 315T>C Gemcitabine pathway variant 48%27 25%27 Gemcitabine
SLC281 1543 G>A Gemcitabine pathway variant 9%27 2%27 Gemcitabine
SLC281 1576 T>C Gemcitabine pathway variant 0%27 47%27 Gemcitabine
SLC282 283A>C Gemcitabine pathway variant 8%27 34%27 Gemcitabine
TYMS 149del (ttaaag) Gemcitabine pathway variant 56%27 27%27 Gemcitabine
SLC 29A1 −1345 C>G Transporters, increased gene activity in vitro 8%30, 84 0%30, 84 Gemcitabine
SLC 29A1 −1050 G>A Transporter, increased gene activity in vitro 19%30 0%30 Gemcitabine
RRM1 −524 T>C Decreased drug response 27%30 36%30 Gemcitabine
CDA −897 C>A Reduced CDA activity in vivo 2% together30 Gemcitabine
CDA 79 A>C (Lys27Gln) Decreased drug response 4-10.8%30 30-36%30 Gemcitabine,
Fluorouracil
CDA 208 G>A (Ala70Thr) Decreased CDA activity 12.5%30 0%30 Gemcitabine,
Fluorouracil
CDA 435 C>T (Thr145Thr) Lower response rates 35-36. 7%30, 85 30-32.5%30, 85 Gemcitabine, Fluorouracil
CYP2C8*3 Lower Paclitaxel Clearance 0-238, 39 1-13%38, 39 Nab-Paclitaxel
CYP2C8*2 Lower Paclitaxel Clearance 2%38 18%38 Nab-Paclitaxel
NTRK genes Fusion gene, oncogenic 0.34%63 0.28%63 NTRK fusion inhibitors
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TPM: Transcripts Per Million