TABLE 3.
Sequences of the double-stranded DNA linkers used for competition of RisA binding to the vrg6 promoter
| Linker 1 | 5′-GAACCAGAACGGGCATTGATCCTCGTGGCGGACGGGCCACGCAAG-3′ |
| 3′-CTTGCGTGGCCCGTCCGCCACGAGGATCAATGCCCGTTCTGGTTC-5′ | |
| Linker 2 | 5′-GTGTGGAAATGTAACCCCACCTGGGGCCCGCCTTGGCTCCCCCCG-3′ |
| 3′-CACACCTTTACATTGGGGTGGACCCCGGGCGGAACCGAGGGGGGC-5′ | |
| Linker 3 | 5′-CGTTTCAACCCATTTCAAAGCCGCGCCCGCCCCAGCGGGACAAAT-3′ |
| 3′-GCAAAGTTGGGTAAAGTTTCGGCGCGGGCGGGGTCGCCCTGTTTA-5′ | |
| Linker 4 | 5′-TTGCCGCAACGCAGCAAACGCCGGCGTCCCGGACTGCGGGCGGTT-3′ |
| 3′-AACCGCCCGCAGTCCGGGACGCCGGCGTTTGCTGCGTTGCGGCAA-5′ | |
| Linker 5 | 5′-GCGGATTGTCGCCATTGCGGGGGCTGTTTTCACAAATTACGCGC-3′ |
| 3′-CGCCTAACAGCGGTAACGCCCCCGACAAAAGTGTTTAAATGCGCG-5′ | |
| Linker 6 | 5′-AAAACAGCCGAGAATAGGCCCGTCGATTAGTCAACTTGGCTGCAC-3′ |
| 3′-TTTTGTCGGCTCTTATCCGGGCAGCTAATCAGTTGAACCGACGTG-5′ | |
| Linker 7 | 5′-GCGCAGCAAGGCAGGTGAAAAATGAAAAAGTGGTTCGTTGCTGCC-3′ |
| 3′-CGCGTCGTTCCGTCCACTTTTTACTTTTTCACCAAGCAACGACGG-5′ | |
| Linker 8 | 5′-GGCATCGGCGCTGCCGGACTCATGCTCTCCAGCGCCGCCCTGGCC-3′ |
| 3′-CCGTAGCCGCGACGGCCTGAGTACGAGAGGTCGCGGCGGGACCGG-5′ | |
| Linker 12 | 5′-TCGTGGCGGACGGGCCACGCAAGGTGTGGAAATGTAACCCCACCT-3′ |
| 3′-AGCACCGCCTGCCCGGTGCGTTCCACACCTTTACATTGGGGTGGA-5′ | |
| Linker 23 | 5′-GGGGCCCGCCTTGGCTCCCCCCGCGTTTCAACCCATTTCAAAGCC-3′ |
| 3′-CCCCGGGCGGAACCGAGGGGGGCGCAAAGTTGGGTAAAGTTTCGG-5′ | |
| Linker 34 | 5′-GCGCCCGCCCCAGCGGGACAAATTTGCCGCAACGCAGCAAACGCC-3′ |
| 3′-CGCGGGCGGGGTCGCCCTGTTTAAACGGCGTTGCGTCGTTTGCGG-5′ | |
| Linker 45 | 5′-GGCGTCCCGGACTGCGGGCGGTTGCGGATTGTCGCCATTGCGGGG-3′ |
| 3′-CCGCAGGGCCTGACGCCCGCCAACGCCTAACAGCGGTAACGCCCC-5′ | |
| Linker 56 | 5′-GCTGTTTTCACAAATTTACGCGCAAAACAGCCGAGAATAGGCCCG-3′ |
| 3′-CGACAAAAGTGTTTAAATGCGCGTTTTGTCGGCTCTTATCCGGGC-5′ | |
| Linker 67 | 5′-TCGATTAGTCAACTTGGCTGCACGCGCAGCAAGGCAGGTGAAAAA-3′ |
| 3′-AGCTAATCAGTTGAACCGACGTGCGCGTCGTTCCGTCCACTTTTT-5′ | |
| Linker 78 | 5′-TGAAAAAGTGGTTCGTTGCTGCCGGCATCGGCGCTGCCGGACTCA-3′ |
| 3′-ACTTTTTCACCAAGCAACGACGGCCGTAGCCGCGACGGCCTGAGT-5′ |