Skip to main content
. 2005 Mar;187(5):1740–1750. doi: 10.1128/JB.187.5.1740-1750.2005

TABLE 2.

Primers used for the different constructs

Primer Sequence
2A GCCGAATTCAGATCTGGTTATAACAAACGCCTCAAGAGGG
2B GCGGATCCGCTCTCATGATATCTCCAAATACC
2A2 GCCGAATTCAGATCTATCGCTAACAAACGCCTCAAGAGGG
2A4 GCCGAATTCAGATCTGGTTACAACAAACGCCTCAAGAGGG
38/1 CAGGATATCGTAATCTCTTGCTCTGAAAACG
38/2 CAGGATATCAGCTTCACGCTGCCGCAAGCA
AADA7.1 GATCTGGTTATAACAATTCATTCAAGCCGACGCCGCTTCGCGGCGCGGCTTAATTCAAGCGTTAGATGGGATCCT
AADA7.2 CTAGAGGATCCCATCTAACGCTTGAATTAAGCCGCGCCGCGAAGCGGCGTCGGCTTGAATGAATTGTTATAACCA
aadB-1 CGGAATTCAGATCTTGCGGCCTAACAATTCGTCCAAGCCGACGCCGCTTCGCGGCGCGGCTT
aadB-2 CGCGGATCCATCTAACACCTGAGTTAAGCCGCGCCGCGAAGCGGCGTCGGCTT
aadB-3 CGCGGATCCAATTGTGCGGCCTAACGCCCGCCTAAGGGGCTGACAACGCA
aadB-4 CGGAATTCTGCGGCCTAACAATTCGTCCAAGCCGACGCCGCTTCGCGGCGCGGC
aadB-5 CGCGGATCCAATTGGGTTATAACACCTGAGTTAAGCCGCGCCGCGAAGCGGCGTCGGCTT
ATT4A GAATTCGTCAAGAGGCTATACAGAC
ATT4B GGATCCTTCAGAACCTTGTGCGTG
ATTI1.1 GCGAATTCGGCTTGTTATGACTGTTTTTTTGTAC
ATTI1.2 GGATCCTGTTGGTCACGATGCTGTAC
C1B GCGGATCCAATTGGGTTATAACGCCCGCTTAAGG
C1B2 GCGGATCCAATTGATCGCTAACGCCCGCTTAAGG
C1B3 GCGGATCCAATTGGGTTACAACGCCCGCTTAAGGGG
C-ACL AAACTGCAGTACCTAACGTTCGCCTAAGGGGCTGACAAC
C-BSI AAACTGCAGTACCGTACGCCCGCCTAAGGGGCTG
C-BSS AAACTGCAGTACCGCGCGCCCGCCTAAGGGGCTG
dfrA1I CGGAATTCAGATCTAAAAGGGTTAACAAGTGGCAGCAACGGATTCGCAAACCTGTCACGCCTTTTGTACCAAAAGCCGCGC
dfrA1II GCGGATCCTGACGCCTAACGCCTGGCACAGCGGATCGCAAACCTGGCGCGGCTTTTGGTACAAAAGGCGTGACAGG
dfrA1III GGCGGATCCAATTGAGGTTAACGCCCGCCTAAGGGGCT
ereA1a CGCGGATCCAATTGAGCATAACGCCCGCCTAAGGGGCTGAC
ereA1b GCGAATTCAGATCTGAGCATAACCTGCGAATCCACCGGACGGTTTTCAACCGCC
ereA1c GCGGGATCCATGTTTAACGCGCTGATCACCGGCGGTTGAAAACCGTCCGGTGGATTC
FD-40 CGCCAGGGTTTTCCCAGTCACGAC
I-ACL TTCGAAAGATCTGGTTATAACGTTCGCCTCAAGAGGGACTGTCA
ICVR2A-G GGAATTCAGATCTGTTATAACGCCTCAAG
I-SNA TTCGAAAGATCTGGTTACGTAAAACGCCTCAAGAGGGACTGT
I-STU TTCGAAAGATCTAGGCCTAACAAACGCCTCAAGAGGGA
IOA GCCGAATTCGGCAAGCGGCATGCATTTACG
IOB GCGGATCCAGATCTGCTGTCAAACCAGATCAATTCGCG
orfA4 GAATTCAGATCTATGACGCCTAACCGGTCGTTCGAGCGGACTGCCCTCGGCAAGCCTCGGTCAGCCGCTCAACTTCAACGTTACGTGGATCC
orfA5 CGCGGATCCACGTAACGTTGAAGTTGAGCGGCTGACCGAGGCTTGCCGAGGGCAGTCCGCTCGAA
orfA6 CGGAATTCAGATCTATGACGCCTAACCGGTCGTTCGAGCGGACTGCCCTCGGCAAGCCTCGGTCAGCC
orfA7 GCGGATCCATGACGCCTAACGTTGAAGTTGAGCGGCTGACCGAGGCTTGCCGAGGGCAG
orfA8 CTCGAATTCATGACGCCTAACCGGTCGTT
orfA9 CCCGGATCCCAATTGGGTTATAACGTTGAAGTTGAGCGGCT
MRV-D21 TTCTGCTGACGCACCGGTG
pirBHI CGCGGATCCGTTGCTAAAACATGAGATAAAAATTG
pirXbII CCGAGCTCTAGATTACCCCTTAGCTTTTTTGGGAG
PLAC1 CGCGAATTCAATGTGAGTTGACTCACTCATTAG
PLAC2 CGCGGATCCCAATTGAGATCTGATATCGAGCTCTGAAATTGTTATCCGCTCACAATT
PNOTΔ GATAGAATTCTGGGGTGCCTAATGAGTGAG
PTRC1 CGCGAATTCCTGAAATGAGCTGTTGACAATTA
REV-48 AGCGGATAACAATTTCACACAGGA
VCHINT1 CGAATTCTGTACAAATAACCAGTTAAATAT
VCHINT2 CGCGGATCCGTGTTATTAAGAAAGGG
VCR2C-T CCCAAGCTTAAATACCTAACACCCGC
VCR2RI CGGAATTCCTTACGGTTATAACAAACGCCTCAAGA
WT-CS AAACTGCAGTACCTAACGCCCGCCTAAG
WT-ICS TTCGAAAGATCTGGTTATAACAAACGCCTCAAG