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. 2023 Oct 18;26(11):108256. doi: 10.1016/j.isci.2023.108256
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

SARS-CoV-2 (COVID-19) Spike RBD antibody, (Clone: HL1003-HU) GeneTex Cat# GTX635866; RRID:AB_2888584
SARS-CoV-2 (COVID-19) Spike RBD antibody, (Clone: HL1003) GeneTex Cat# GTX635792; RRID:AB_2888574
SARS-CoV-2 (COVID-19) Spike antibody, (Clonality: Polyclonal) GeneTex Cat# GTX135356; RRID:AB_2887482

Biological samples

Serum or Plasma from SARS-CoV-2 vaccinated or Un-vaccinated Emory Hospital, Atlanta, GA, USA. N/A

Chemicals and Recombinant proteins

Dulbecco’s Modified Eagle Medium/Ham F-12 50/50 Mix (DMEM F12) Corning Cat#10-090-CV
TrypLE™ Express Enzyme (1X), phenol red Gibco Cat#12605010
Pen-strep (5000 IU/mL, 5 mg/mL), 100 mL MPBiologicals Cat#1670049
DPBS Gibco Cat#14190-144
2-Mercaptoethanol Gibco Cat#21985023
Bovine Serum Albumin (BSA) Fisher Bioreagents Cat#BP1600-100
Sodium Chloride Sigma Cat#S3014
Sodium phosphate monobasic monohydrate Sigma Cat#S3522
Imidazole Sigma Cat#5513
Mini-PROTEAN® TGX™ Precast Gels Bio Rad Cat#4561084
Amicon® Ultra-15 Centrifugal Filter Unit Millipore Cat#UFC905008
Amicon®Ultra-4 Centrifugal Filter Unit Millipore Cat#UFC805008
Amicon® Ultra-0.5Centrifugal Filter Unit Millipore Cat#UFC503024
Amicon® Ultra-15 Centrifugal Filter Unit Millipore Cat#UFC903024
NativeMark™ Unstained Protein Standard Thermo Fisher Scientific Cat#LC0725
Corning® 500 mL Polycarbonate Erlenmeyer Flask with Vent Cap Corning Cat#431145
ExpiFectamine™ 293 Transfection Kit Thermo Fisher Scientific Cat#A14524
Expi293™ Expression Medium Thermo Fisher Scientific Cat#A1435102
HisPur Ni-NTA Resin Thermo Fisher Scientific Cat#88221
Opti-MEM™ I Reduced Serum Medium Thermo Fisher Scientific Cat#31985070
Pierce™ Protein G Agarose Thermo Fisher Scientific Cat#20399
Stericup filters Thermo Fisher Scientific Cat#290-4520
Slide-A-lyzer Dialysis Cassette Thermo Fisher Scientific Cat#66030
50x TAE (Tris/Acetic Acid/EDTA) Buffer, 5 L BioRad Cat#1610773
Transfection Reagent - BioT (1 mL) Bioland Scientific Cat#BioT1
Pierce™ Protein G IgG Binding Buffer Thermo Fisher Scientific Cat#21011
Pierce™ IgG Elution Buffer Thermo Fisher Scientific Cat#21009
TWEEN® 20 Sigma Cat#P9416-100 mL
cOmplete™, Mini, EDTA-free Protease Inhibitor Cocktail Sigma Cat#11836170001
Bio-Safe™ Coomassie Stain BioRad Cat#1610786EDU
Falcon® 96-well White/Clear Flat Bottom TC-treated Microplate, with Lid, Sterile, Corning Cat#353377
White 96-well Microplate with Clear Bottom, Sterile and Tissue Culture Treated, Lid Included PerkinElmer Cat#6005181
Pierce™ BCA Protein Assay Kit Thermo Fisher Scientific Cat#23227
Anti-His Biosensors ForteBio Cat#18-5114
ProA Biosensors Sartorius Cat#18-5010
EDAC, 1-Ethyl-3-(3-Dimethylaminopropyl)carbodiimide, Hydrochloride Thermo Fisher Scientific Cat#E2247
Streptavidin-β-galactosidase (SBG) Quanterix Cat# 103798
Resorufin ß-D-galactopyranoside (RGP) Quanterix Cat#103159
Homebrew beads-750 Quanterix Cat#103529
Homebrew beads-488 Quanterix Cat#103526
Bead Conjugation buffer Quanterix Cat#101357
Biotinylation Reaction buffer Quanterix Cat#101358
Blocking buffer Quanterix Cat#101356
Detector/Sample Diluent buffer Quanterix Cat#101359
Bead Diluent Quanterix Cat#100458
SARS-CoV-2 lentiviral kit BEI-Resources Cat# NR-53816
Bright-Glo kit Promega Cat#E2610
SARS-CoV-2 Spike (pre-fusion) trimer-Wuhan-WT This study jroback@emory.edu
SARS-CoV-2 Spike (pre-fusion) trimer-Delta This study jroback@emory.edu
SARS-CoV-2 Spike (pre-fusion) trimer-Omicron BA1 This study jroback@emory.edu
SARS-CoV-2 Spike (pre-fusion) trimer-Omicron-BA2 This study jroback@emory.edu

Experimental models: Cell lines

HEK-293T ATCC Cat#CRL-3216
HEK-293T-ACE-2 BEI-Resources Cat#NR-52511
Expi-293 Thermo Fisher Scientific Cat#A14527

Software and algorithms

Prism 10 GraphPad https://www.graphpad.com/
PyMoL Schrödinger https://pymol.org/2/