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. 2023 Oct 24;52(22):7848–7948. doi: 10.1039/d0cs00936a

Fig. 23. Systematic evaluation of LH in a circular ring configuration. (A) Ring of Cy3 D dyes (green) surrounds a Cy5 A dye (red) on a flat, square-shaped DNA origami platform. The zoomed-in window shows the precise fluorophore attachment sites using a caDNAno scheme. (B) For each number of Ds N, all six permutations of adjacent D positions (gray boxes) were prepared and compared to an acceptor only control sample (gray frame). For N = 2, all possible dye geometries were assembled resulting in three groups of different mean D–A distances (colored boxes). The seven structures highlighted with black frames were analyzed both in ensemble and single-molecule measurements. (C) Normalized fluorescence emission spectra with A inside and outside the D ring. (D) AEtot obtained from ensemble measurements. Samples analyzed include one-D (blue), two-D (green), and six-D (red) assemblies. (E) Influence of Mg2+ concentration on antenna effect (AEtot) for the six-D ring with an A in the center. Increases in Mg2+ concentration to shrink the interhelix distances in DNA origami structures. Reproduced with permission from ref. 283 Copyright 2016 American Chemical Society.

Fig. 23