. Author manuscript; available in PMC: 2024 Nov 1.

Published in final edited form as: J Clin Virol. 2023 Sep 12;168:105583. doi: 10.1016/j.jcv.2023.105583

Table 2.

Nt (upper) and aa (lower) identity (%) of HEV genomes obtained from the Irish blood donor (case 3) and the camel (case 4) with reference strains for selected genomic regions recommended by ICTV for species demarcation.

	ORF1				ORF2
Genotype	Methyltransferase^*		RNA-directed RNA polymerase^*		Aa121–413^*
	Case 3	Case 4	Case 3	Case 4	Case 3	Case 4
1^a	75.9–77.9	76.2–77.5	73.6–74.3	74.8–75.6	78.6–79.5	78.6–79.9
1^a	85.6–86.7	87.3–89.0	85.6–86.4	86.9–87.9	95.2–95.8	93.8–94.6
2^b	76.2	77	72.9	74.8	78.3	79.9
2^b	86.7	91.7	85.4	86	96.9	94.9
3^c	77.5–82.1	74.8–79.2	76.0–79.6	75.5–78.2	78.2–81.7	77.4–80.6
3^c	91.2–95.0	91.2–96.1	89.3–92.4	88.9–92.2	96.9–98.3	93.2–94.6
4^d	74.2–77.0	75.3–78.1	74.3–75.8	73.6–74.9	77.3–79.0	79.0–80.9
4^d	90.1–91.7	92.3–93.9	86.2–87.7	85.8–87.3	95.2–96.6	92.9–94.3
5^e	74.8	75.9	75.2	74.7	79.1	79.3
5^e	89.0	91.2	86.4	85.6	96.0	94.1
6^f	76.4–77.7	74.6–75.3	73.9–75.7	74.4–74.7	78.4–79.1	77.7–78.5
6^f	87.8–89.5	90.1–92.8	84.2–87.5	84.6–86.2	96.6	93.2
7^g	75.9–76.1	79.4–81.2	74.4–75.7	80.9–81.2	78.6–79.1	81.4–81.9
7^g	91.2–91.7	96.7–97.2	88.1–88.9	94.3–94.9	96.0	95.8–96
8^h	76.8–77.4	77.3–77.9	76.5–77.0	76.6–77.5	78.9–80.1	80.1–80.9
8^h	92.3–92.8	96.1–96.7	88.1–88.3	91.0–91.2	96.0	95.8

Calculated with Geneious Prime 2022.0.1., including GenBank accession numbers:

^a)

M73218, X98292, AY230202, AY204877, JF443721

^b)

KX578717

^c)

AB248521, AB290312, AB290313, AB369687, AB369689, AF082843, AF455784, AP003430, AY115488, EU360977, FJ705359, FJ998008, JQ013793, JQ013794, JQ953664, KP294371, KU513561, KY436898, F444074, MF959764, MF959765, MK050463, MT920909, MW002523

^e)

AB573435

^f)

AB602441, AB856243

^g)

KJ496143, KJ496144

^h)

KX387865, KX387866, KX387867

as annotated for FJ705359.1