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. 2023 Nov 6;23:foad048. doi: 10.1093/femsyr/foad048

Table 3.

Specific growth rate, stoichiometries of biomass and (by)product formation and biomass-specific acetate consumption rates in anaerobic bioreactor batch cultures of S. cerevisiae strains IME324 (reference strain), IMX2503 (Δgpd2 Δald6 pTDH3-eutE), and IMX2502 (non-ox PPP↑ Δgpd2 Δald6 pTDH3-eutE pDAN1-PRK 2x pTDH3-cbbM pTPI1-groES pTEF1-groEL).

Strain IME324 IMX2503 IMX2502
Relevant genotype Reference gpd2∆ ald6∆ eutE gpd2∆ ald6∆ eutE
PRK 2x cbbM
µ (h−1) 0.31 ± 0.00 0.32 ± 0.00 0.25 ± 0.01
Y biomass/glucose (gx g−1) 0.071 ± 0.003 0.081 ± 0.001 0.072 ± 0.001
Y ethanol/glucose (mol mol −1) 1.65 ± 0.02 1.76 ± 0.01 1.71 ± 0.00
Y acetaldehyde/glucose (mol mol −1) <0.005 <0.005 0.026 ± 0.001
Y glycerol/glucose (mol mol −1) 0.117 ± 0.000 0.033 ± 0.000 0.024 ± 0.002
Y acetate/glucose (mol mol−1) −0.032 ± 0.004 −0.084 ± 0.002 −0.023 ± 0.001
Glycerol production (mmol gx−1) 8.5 ± 0.1 2.1 ± 0.1 1.8 ± 0.1
Acetate consumption (mmol gx−1) 2.3 ± 0.3 5.7 ± 0.3 1.7 ± 0.1
q acetate (mmol gx−1 h−1) −0.7 ± 0.0 −1.8 ± 0.1 −0.4 ± 0.0
Electron recoveries (%) 99–101 99–100 100–101

Cultures were grown on synthetic medium with 20 g L−1 of glucose and 50 mmol L−1 of acetate at pH 5 and at 30°C and sparged with a 90:10 mixture of N2 and CO2. Stoichiometries of biomass and metabolite production formation were calculated from at least six sampling points in the exponential growth phase. Values represent averages ± mean deviations of measurements on independent duplicate cultures. Since the high concentration of CO2 in the inlet gas precluded construction of carbon balances, degree-of-reduction balances were used to verify data consistency (Roels 1980). Non-ox PPP↑ indicates the integration of the expression cassettes of pTDH3-RPE1, pPGK1-TKL1, pTEF1-TAL1, pPGI1-NQM1, pTPI1-RKI1, and pPYK1-TKL2. Symbols: μ, specific growth rate; gx, gram biomass; Y, yield; qacetate: biomass-specific rate of acetate consumption in exponential growth phase.