Skip to main content
. 2005 Mar;73(3):1873–1878. doi: 10.1128/IAI.73.3.1873-1878.2005

TABLE 1.

Real-time quantitative reverse transcriptase PCR probes and primers

RNA target Probe sequence (5′-3′) Forward primer sequence (5′-3′) Reverse primer sequence (5′-3′)
18 SrRNA ACCGGCGCAAGACGCACCAG CGCCGCTAGAGGTGAAATTCT CATTCTTGGCAAATGCTTTCG
TLR1 TCAGCCTCAAGCATTTGGACCTCTCCT TGATCTTGTGCCACCCAACA GCAGGGCATCAAAGGCATTA
TLR2 CGTTTTTACCACCCGGATCCCTGTACT AAGATGCGCTTCCTGAATTTG TCCAGCGTCTGAGGAATGC
TLR4 CCTGGTGTAGCCATTGCTGCCAACA CCTCTGCCTTCACTACAGAGACTTT GTGGAAGCCTTCCTGGATGA
TLR5 TGGTAATATCTCCCTGTTCTTCAGACGGCA AACTTGACTTGCTCATAGGTGTGATC CAGCCTCGGAAAAAGGCTATC
TLR6 AGCCAAGACAGAAAACCCATCGTGGG TCTGGGATAGCCTCTGCAACA GGCGCAAACAAAGTGGAAAC
TLR9 CGACCATGCCCCCAATCCCTG TGATGTGGGTGGGAATTGC GGGACTTTTGGCCACATTCTAT
MD2 TCTTTTCGACGCTGCTTTCTCCCATATTG GGAGATATTAAATCATGTTGCCATTTATT ACCACTGTTGCTTCTCAGATTCAG
MyD88 CCCTTGGTCGCGCTTAACGTGG CTGGACTCCTTCATGTTCTCCAT GATAGGCGGCGCCTCACT
TIRAP TGCCGTGTGCTGCTCATCACTCC TGCCAGGCACTGAGTCGTAGT GGCCTGCAGCATCTGGTACT
TNF-α TCAGCCTCTTCTCATTCCTGCTTGTGG TCCAGGCGGTGCCTATGT CGATCACCCCGAAGTTCAGT
iNOS CTTCCGGGCAGCCTGTGAGACCT CGCAGCTGGGCTGTACAA TGATGTTTGCTTCGGACATCA
a

Primers and probes were designed by using the Primer Express software program (PE Applied Biosystems). The probes were labeled with the fluorescent reporter dye 5-carboxyfluorescein at the 5′ end and with the quencher N,N,N,N′-tetramethyl-6- carboxyrhodamine at the 3′ end.