Table 1.
Information for each disease, showing terms associated with disease name (Associated terms), terms annotated to the disease gene (Annotated terms), number of terms associated with disease name and also used to annotate the disease gene (Common eVOC terms), number of common terms falling within the highest four ranking terms (Terms ranked in top 4) and total number of candidate disease genes selected
Disease | Disease gene | Number of abstracts | Candidate genes | Associated terms | Annotated terms | Common eVOC terms | Terms ranked in top 4 |
---|---|---|---|---|---|---|---|
Gilberts syndromea | UGT1A1 | 316 | 216 | 37 | 8 | 6 | 1 |
Waardenburg syndromea | PAX3 | 213 | 321 | 57 | 10 | 5 | 1 |
Frasier syndrome | WT1 | 36 | 259 | 11 | 16 | 4 | 3 |
Dysbetalipoproteinemia | APOE | 331 | 239 | 37 | 38 | 11 | 3 |
Chronic lymphatic leukemia | BCL2 | 407 | 129 | 65 | 28 | 20 | 3 |
Bloom syndrome | BLM | 447 | 379 | 51 | 22 | 14 | 3 |
Beckwith Weidemann | IGF2 | 505 | 292 | 76 | 22 | 16 | 3 |
Ankylosing spondylitis | HLA-B | 3451 | 350 | 137 | 53 | 38 | 3 |
Wilms tumour | WT1 | 4764 | 292 | 152 | 16 | 15 | 3 |
Muscular dystrophy | DMD | 7210 | 142 | 166 | 40 | 33 | 3 |
Thalassemia | HBB | 7510 | 129 | 143 | 34 | 31 | 3 |
Retinoblastoma | RB1 | 8617 | 334 | 175 | 35 | 34 | 3 |
Ovarian cancer | BRCA1 | 11 227 | 238 | 142 | 25 | 24 | 3 |
Neuroblastoma | MYCN | 15 409 | 367 | 197 | 20 | 20 | 3 |
Familial hypercholesterolemia | LDLR | 15 506 | 302 | 159 | 34 | 31 | 3 |
Prostate cancer | ERBB2 | 17 876 | 257 | 164 | 30 | 29 | 3 |
Breast cancer | BRCA1 | 51 759 | 238 | 198 | 25 | 24 | 3 |
aKnown disease gene not present in candidate gene set