Table III.
Analysis of CYP86A promoters
*, Indicates agreement between our RT-PCR results and existence of a known cis-element for the same inducer.
Element | Function | CYP86A1 | CYP86A2 | CYP86A4 | CYP86A7 | CYP86A8 |
---|---|---|---|---|---|---|
Elements Found in AGRIS | ||||||
ABF/ABRE | ABA | 1* | ||||
ABFs | ABA | 1* | ||||
ABRE-like | Dehydration/low temperature | 1* | ||||
AG in SUP/AP1 in AP3 | MADS box domain | 1 | 1 | |||
ARF/ARF1 | Auxin | 3* | ||||
ATHB2 | Homeobox domain | 1 | ||||
ATHB6 | ABA | 1* | ||||
AtMYC2 in RD22 | Drought/ABA | 1* | 2* | 1* | 3* | 1* |
Box II | Core | 2 | 3 | 3 | 1 | |
CArG | Flowering | 1 | 2 | |||
CCA1 | Phytochrome | 1 | 1 | 1 | ||
DPBF1 and 2 | ABA/embryo | 2* | 4* | 3* | 3* | 2* |
Evening element | Circadian | 1 | ||||
GATA | Light response | 4 | 5 | 5 | 6 | 7 |
G box | Core | 1 | ||||
HSEs | Heat stress | 1 | ||||
I box | Light | 3 | ||||
L1 box | L1 cell of shoot apices | 1 | ||||
LTRE | Low temperature | 1 | ||||
MYB | Flowering/phenylpropanoid | 3 | 1 | |||
MYB1 | G-protein binding site | 1 | ||||
MYB4 | Stresses | 2 | 4 | 2 | 4 | |
RAV1-A | Plant specific | 9 | 4 | 2 | 8 | 4 |
RAV1-B | Plant specific | 1 | ||||
SV40 core | Core | 1 | ||||
T box | Elements in GAPB gene | 2 | 1 | 2 | 2 | |
TELO box | Root | 1 | 2 | |||
W box | Disease | 2 | 4 | 4 | 2 | |
Z box | Elements in CAB1 gene | 1 | ||||
ABA* | ABA* | ABA* | ABA* | ABA* | ||
ACC | Clofibrate | ACC | MeJA | IAA | ||
Clofibrate | Drought* | Cold | Clofibrate | |||
Cold* | Etiolation | IAA* | ||||
BR | Dark adaptation | |||||
Mannitol* | IAA | |||||
Mannitol* | ||||||
Wounding | ||||||
Elements Found in PlantCARE | ||||||
ABRE (from multiple species) | ABA | 8* | 7* | 2* | 5* | 3* |
AUXRE | Auxin | 1* | ||||
AUXRE core | Auxin | 2 | 1 | 1* | ||
CGTCA | MeJA | 1* | 2 | |||
ERE | Ethylene | 9* | 5 | 3* | 2 | 8 |
GC motif | Anoxic | 3 | 6 | 1 | ||
HSE | Heat stress | 12 | 15 | 25 | 16 | 15 |
LTR | Low temperature | 1* | 1* | 1 | ||
MBS | Drought | 1* | 2* | |||
P box | GA | 1 | 6 | 7 | 3 | 2 |
TATC box | GA | 2 | 1 | 1 | 1 | 3 |
TCA element | SA | 3 | 6 | 10 | 3 | 5 |
TGA box | Auxin | 1* | ||||
TGACG motif | MeJA | 1* | 2 | |||
TGA-1 | Auxin | 2 | ||||
WUN motif | Wounding | 7 | 21* | 14 | 19 | 15 |
ABA* | ABA* | ABA* | ABA* | ABA* | ||
ACC* | Clofibrate | ACC* | MeJA* | IAA* | ||
Clofibrate | Drought* | Cold* | Clofibrate | |||
Cold* | Etiolation | IAA | ||||
BR | Dark adaptation | |||||
Mannitol* | IAA | |||||
Mannitol* | ||||||
Wounding* |