TABLE 4.
Mycobacterium phage and prophage clusters
| Cluster a | # Phages | Mean length (bp) | Mean # CDS b | Mean # tRNAs c |
|---|---|---|---|---|
| A (+MabJ) | 742 | 51,721 | 91 | 1 |
| B | 360 | 68,784 | 100 | 0 |
| C | 163 | 155,555 | 231 | 32 |
| D | 21 | 64,805 | 89 | 0 |
| E | 114 | 75,542 | 145 | 2 |
| F | 203 | 57,326 | 104 | 0 |
| G | 66 | 42,268 | 63 | 0 |
| H | 10 | 69,108 | 96 | 0 |
| I | 8 | 49,818 | 78 | 0 |
| J | 38 | 111,065 | 236 | 1 |
| K | 165 | 59,894 | 95 | 1 |
| L | 95 | 75,349 | 123 | 12 |
| M (+MabI) | 27 | 81,286 | 138 | 21 |
| N | 38 | 42,905 | 69 | 0 |
| O | 21 | 71,287 | 126 | 0 |
| P | 43 | 47,917 | 79 | 0 |
| Q | 20 | 53,849 | 84 | 0 |
| R | 8 | 71,339 | 100 | 0 |
| S | 17 | 64,993 | 113 | 0 |
| T | 7 | 42,746 | 62 | 0 |
| U | 3 | 69,864 | 108 | 1 |
| V | 4 | 77,869 | 148 | 20 |
| W | 8 | 61,079 | 90 | 1 |
| X | 2 | 88,037 | 177 | 4 |
| Y | 4 | 76,836 | 132 | 2 |
| Z | 2 | 50,807 | 86 | 0 |
| AA | 2 | 140,785 | 214 | 0 |
| AB | 6 | 49,359 | 72 | 0 |
| AC | 4 | 70,029 | 120 | 1 |
| AD (+MabL) | 53 | 65,842 | 91 | 0 |
| AE | 2 | 71,497 | 107 | 0 |
| HA (MabA) | 150 | 62,617 | 102 | 0 |
| HB (MabB) | 139 | 40,152 | 59 | 0 |
| HC (MabC) | 168 | 51,353 | 70 | 0 |
| HD (MabD) | 64 | 52,670 | 80 | 0 |
| HE (MabE) | 76 | 60,206 | 76 | 0 |
| HF (MabF) | 25 | 54,403 | 78 | 0 |
| HG (MabG) | 101 | 54,495 | 79 | 0 |
| HH (MabH) | 39 | 43,299 | 64 | 0 |
| HI | 6 | 49,318 | 69 | 0 |
| HJ | 5 | 51,843 | 72 | 0 |
| HK (MabK) | 66 | 75,368 | 115 | 0 |
| HL | 5 | 55,466 | 88 | 0 |
| HM | 4 | 54,297 | 80 | 0 |
| HN (MabN) | 52 | 41,488 | 65 | 0 |
| HO (MabO) | 21 | 45,419 | 67 | 0 |
| HP (MabP) | 5 | 51,658 | 62 | 0 |
| HQ (MabQ) | 16 | 75,860 | 106 | 0 |
| HR (MabR) | 13 | 67,456 | 96 | 0 |
| HS | 4 | 58,526 | 89 | 0 |
| HT | 4 | 78,035 | 133 | 3 |
| HU | 3 | 43,693 | 61 | 0 |
| HV | 2 | 38,330 | 56 | 1 |
| HW | 2 | 60,248 | 94 | 1 |
| HX | 2 | 50,134 | 82 | 0 |
| HY | 2 | 63,350 | 96 | 4 |
| HZ | 2 | 45,852 | 70 | 1 |
| IA (MabA2-3) | 44 | 61,507 | 102 | 0 |
| IB | 2 | 62,878 | 97 | 0 |
| IC | 3 | 54,210 | 77 | 0 |
| ID | 9 | 43,128 | 65 | 0 |
| DS6A | N/A | 60,588 | 97 | 0 |
| Kumao | N/A | 70,373 | 115 | 0 |
| LilSpotty | N/A | 49,798 | 85 | 0 |
| MooMoo | N/A | 55,178 | 97 | 0 |
| prophi1185650.276_36-1 | N/A | 49,584 | 72 | 0 |
| prophi1214063.4_1-1 | N/A | 56,097 | 78 | 0 |
| prophi146020.3_10-1 | N/A | 50,110 | 75 | 0 |
| prophi1764.28_34-1 | N/A | 56,684 | 69 | 0 |
| prophi1767.33_1-1 | N/A | 79,626 | 131 | 27 |
| prophi2051551.3_3-1 | N/A | 37,702 | 59 | 0 |
| prophi258505.4_5-1 | N/A | 44,470 | 65 | 0 |
| prophi29313.6_5-1 | N/A | 48,433 | 66 | 1 |
| prophi319705.112_2-1 | N/A | 46,562 | 69 | 0 |
| prophi418031.3_7-1 | N/A | 61,690 | 85 | 0 |
| prophi451644.8_76-1 | N/A | 54,733 | 85 | 0 |
| prophi482462.3_2-2 | N/A | 60,478 | 93 | 0 |
| prophi512402.5_9-1 | N/A | 48,313 | 73 | 0 |
| prophiT5079-1 | N/A | 55,420 | 80 | 0 |
a
Cluster designation, with previously published clusters indicated in parentheses; singleton phages are indicated in italics.
b
Average number of protein-coding genes for phages in the cluster.
c
Average number of tRNA genes for phages in the cluster.