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. 2023 Nov 16;13(11):e10727. doi: 10.1002/ece3.10727

TABLE 2.

Primer sequence, amplicon size, genomic coordinates (assemblies Sp. aurata: GCA_900880675.2; D. labrax: GCA_000689215.1) and annealing temperature for each studied genomic region.

Species Gene Genomic coordinates Annealing temperature (°C) Primer sequence (5′‐3′) Amplicon size (bp)
Dicentrarchus labrax vgll3 9,203,305–9,203,951 a 63 TACCCTCCCCGATACCTGG 646
TGTGTGGACAGTGCAGGAC
9,202,574–9,203,170 61 TCTCTCCCTGTCTCCTCCTC 596
CTGGGATGGATAGGTGCTGT
9,201,705–9,202,720 63 TGCCTGGATGTGATGTACCA 1015
CTGGTGTCGCAGGTCCCT
9,201,381–9,201,802 61 GGAGCGCTCTGAAAACTTGT 421
TGTTGTTGCTGGTGATGGTG
six6 11,589,507–11,590,303 61 TCTTTCTTTAACACCGCCCG 796
ACACCGACTCGTTCTTGTTG
11,590,632–11,591,488 a 63 GGCTACAGGACTTACACCCA 856
AAGTACCACAGCAAGATCGC
11,588,596–11,589,739 61 GCTATCTATCCGCCCTCTTATTT 1149
CCCTCCGATGATTTCCTATTGG
11,592,056–11,592,572 61 GAATGTGACATCTGACGGGC 515
CGAAGAGACAGAGCAGATCG
Sparus aurata vgll3 24,911,798–24,912,208 a 63 AACGTCTATCACCCTCACCC 410
ACCAAACTGACGTCTTTGCT
24,910,950–24,911,675 63 GCTCCCATTCTGCTCCCA 725
CCGGGTGGTTGAAGGAGAC
24,910,316–24,911,343 63 GAGCGCACTACCTCCCTG 1027
CACCACGTCGCCAATGTC
24,909,934–24,910,621 61 CCAATCACAAGCGCTCTGAA 687
CCGACTTTTAGCGCATGGTT
six6 14,404,868–14,405,650 61 GTCTTTCTTTAACAGCGTGCG 782
GCACCGACTCGTTCTTGTTG
14,406,022–14,406,799 a 63 AACCGCAGACAAAGAGACAG 777
ACCCCTTATTAAACAACAAGCAC
14,403,964–14,405,087 63 GTGTGTCTGATACTAAAGCCGA 1123
TCTATTGGACTTGGCAGATTGG
14,407,370–14,407,840 63 GTCATAGTGCCTGCGTTGAG 470
CGAAGAGACAGAGCAGATCG
a

Containing polymorphic SNPs.