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. 2023 Nov 16;13:20021. doi: 10.1038/s41598-023-47215-4

Table 10.

Active site interacting residues, distance (Å) and binding affinity (Kcal/mol) of phytochemical constituents of O. grossii with 6QME.

Interaction of EOs from O. grossii with 6QME Residues Types of interaction Bond distance (Å) Binding affinity (Kcal/mole)
p-cymene ALA366 Hydrophobic 3.586  − 5.2
ɤ-terpinene TYR572 Hydrophobic 3.625  − 5.2
TYR334 Hydrophobic 4.655
TYR334 Hydrophobic 4.338
ALA556 Hydrophobic 5.320
Cis-sabinene ALA366 Hydrophobic 4.748  − 5.1
Eucalyptol ALA366 Hydrophobic 5.327  − 5.8
α-campholenal GLY464 Hydrogen bond 2.564  − 5.5
ALA366 Hydrophobic 4.372
Isoborneol ILE416 Hydrogen bond 2.753  − 6.1
VAL463 Hydrogen bond 2.592
GLY417 Hydrogen bond 3.561
ALA366 Hydrophobic 5.239
Borneol ILE559 Hydrogen Bond 2.177  − 6.1
ALA366 Hydrophobic 4.791
isopulegone ALA556 Hydrophobic 3.987  − 5.7
ARG415 Hydrophobic 3.951
Myrtenyl acetate ALA366 Hydrophobic 4.030  − 6.6
Carvacrol VAL418 Hydrogen bond 3.170  − 5.9
VAL465 Hydrogen bond 2.389
ALA366 Hydrophobic 3.759
Caryophyllene ALA366 Hydrophobic 4.179  − 7.5
ɤ- Maaliene ALA366 Hydrophobic 4.556  − 7.4
ALA366 Hydrophobic 4.727
Caryophyllene oxide ALA366 Hydrophobic 4.9411  − 7.9
Valencene ALA366 Hydrophobic 3.831  − 7.2
co-crystallized ligand J6Q SER508 Hydrogen bond 2.560  − 8.3
SER602 Hydrogen bond 2.152
ALA556 Hydrophobic 3.779
TYR525 Hydrophobic 3.769
TYR525 Hydrophobic 4.388
TYR572 Hydrophobic 5.408
ALA556 Hydrophobic 4.137