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. 2023 Nov 16;14:7432. doi: 10.1038/s41467-023-43201-6

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — a Representative example of the sample UKF259. Colors indicate the TCR label of the spot. b Stacked barplot of the distribution of T cell response classes (indicated by colors) across samples. c Barplot of the number of spots classified as clonal. d Stacked barplot of the distribution of histological groups across T cell response classes. e–g Surface plots with histology (left) and spatial mapping of single clones. Surface plots contain the dimensions of the samples (in mm) on the x and y axes.