Table 3.

Accuracy comparison with real reads.

	Intel FPGA-based System		Xilinx FPGA-based System
	ONT	PacBio	ONT	PacBio
Total reads	90,83,052	1,17,14,594	90,83,052	1,17,14,594
Unmapped in both	23,228	62,461	23,228	62,492
Same	90,45,287	1,16,25,209	90,53,718	1,16,35,943
Mismatches	14,535	26,883	6106	16,159
Exclusively aligned by minimap2	2	10	0	0
Exclusively aligned by minimap2-fpga	0	31	0	0
Same %	99.58	99.24	99.68	99.33