Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2023 Nov 20;14:7538. doi: 10.1038/s41467-023-43178-2

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Fig. 1 — a Number of sc-triads (1:1:1) and non-sc-homoeologs with varying number of homologs across subgenomes in common wheat. b Workflow for predicting the core factors regulating sc-triads (1:1:1) and non-sc-homoeologs across subgenomes. c LASSO coefficients of the trans-factor binding-related regulation of non-sc-homoeologs (top) and sc-triad (bottom) genes. The coefficient value represents the relative importance of the trans-factor contributing to regulation. d Enrichment of different homoeologous groups among LHP1-targeted genes. e Fractions of homoeolog groups targeted by LHP1. f ChIP-seq read densities of LHP1 and H3K27me3 surrounding H3K27me3 peaks. g Genomic tracks illustrating the co-occupation of LHP1 and H3K27me3 ChIP-seq signals surrounding VRN1-5A and its homoeologs. h Enrichment of the typical epigenetic marks in eight phylostrata corresponding to the phylogenetic internodes, which are bordered by vertical grids and denote sets of genes whose founder genes originated in the corresponding evolutionary periods (e.g., the left-most phylostratum represents the common ancestor of dicots and monocots). The color represents the enrichment score. High enrichment scores reflect the expansion of the targets with a given epigenetic mark in the corresponding phylostrata.