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. 2023 Nov 20;10:813. doi: 10.1038/s41597-023-02645-7

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Fig. 3 — Variant allele frequencies (VAFs) for heterozygous SNPs were obtained for each sample using GATK HaplotypeCaller with ploidy 2. Two example distributions are shown here for samples LIBD01 and LIBD104 (collection 2967). The distribution is shifted from 50% and does not appear normally distributed for LIBD104 suggesting contamination of the sequenced sample with unrelated DNA.