Fig 6. Core genome SNP-based phylogenetic tree of the 95 E. coli strains analyzed in this study characterized by phylogroup, sequence type (ST), serotype, and fimtype with the corresponding virulence genes (shown in colored circles according to the virulence gene group).

The hospital codes (Bwera: Bwera General Hospital, Bombo: Bombo Hospital, and Gulu: Gulu Regional Referral Hospital). The figure was produced using the iTOL tool.