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. 2023 Jul 9;132(3):365–382. doi: 10.1093/aob/mcad078

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Fig. 6. — Synteny comparisons based on coding DNA. Pairs of synteny blocks (i.e. genes in the same position in both comparisons) are shown along the nine chromosomes of Alloteropsis semialata (genomes RSA5-3 and AUS1) and Setaria italica v2.2. High-quality matches (at least eight reciprocal best matches in a nine-match window) are shown in black or red, with the others in grey. Rectangles highlight major rearrangement, in blue for those specific to RSA5-3, in magenta for those specific to AUS1 and in green for those that differ between S. italica and both A. semialata assemblies.