Data type | Max.frag | Width (bp) | Binned size | Threshold Tspan8± | Threshold MEC | Distance between | Max merged width |
---|---|---|---|---|---|---|---|
ATAC | 500 | 100 | 2 kb | 8 | 6 | 500 | 10000 |
RNA PolII | 700 | 1000 | 50 kb | 2 | 2 | 1000 | 50000 |
H3K36me3 | 600 | 1000 | 50 kb | 1.8 | 1.8 | 1000 | 50000 |
H3K4me1 | 1000 | 1000 | 50 kb | 1.8 | 1.8 | 1000 | 50000 |
H3K4me3 | 1000 | 1000 | 50 kb | 1.8 | 1.8 | 1000 | 50000 |
H3K9ac1 | 600 | 1000 | 50 kb | 1.8 | 1.8 | 1000 | 50000 |
H3K27ac | 1000 | 1000 | 50 kb | 1.8 | 1.8 | 1000 | 50000 |
H3K27me3 | 1000 | 10000 | 1 Mb | 1.8 | 1.8 | 10000 | 1000000 |
H2AK119ub | 800 | 10000 | 1 Mb | 2 | 1.8 | 10000 | 1000000 |
H3K9me2 | 600 | 100000 | 5 Mb | 2 | 1.5 | 100000 | 5000000 |
H3K9me3 | 600 | 100000 | 5 Mb | 1.2 | 1.2 | 100000 | 5000000 |