Table 2.

Assembly statistics of the Salmonella enterica serotypes isolated from SSCFs. For serotypes with more than one isolate, each row represents the average calculated from different isolates per serotype.

Serotype	Coverage	Size (Mb)	Contigs	GC %	BUSCO	N50	Completeness	Contamination	Gene
S. Agbeni	35.4	4.5	42	52.2	98.65	382,607	100.0	0.3	4292
S. Anatum	66.9	4.6	24	52.2	98.65	562,293	100.0	0.0	4338
S. Berta	69.4	4.7	41	52.2	98.65	289,914	100.0	0.0	4465
S. Brenderup	76.0	4.7	27	52.2	98.65	497,120	100.0	0.1	4419
S. Cerro	69.3	4.6	61	52.2	98.65	174,627	99.9	0.1	4431
S. Dublin	55.9	4.9	37	52.1	98.65	406,024	99.7	0.3	4824
S. Enteritidis	64.9	4.6	32.5	52.1	98.65	440,347	100.0	0.2	4444
S. Give	78.7	4.5	29	52.2	98.65	454,909	100.0	0.0	4378
S. Hartford	36.8	4.8	60	52.1	98.65	236,095	99.4	0.1	4592
S. Litchfield	76.3	4.4	52	52.2	98.65	252,267	100.0	0.0	4391
S. Montevideo	71.3	4.6	31.8	52.3	98.65	433,986	100.0	0.2	4348
S. Muenchen	78.2	4.6	29	52.2	98.65	521,499	100.0	0.0	4345
S. Newport	62.7	4.8	36	52.1	98.65	563,829	100.0	0.1	4691
S. Oranienburg	53.2	4.6	33	52.1	98.65	542,191	100.0	0.0	4335
S. Paratyphi	82.4	4.6	29	52.3	98.65	369,141	100.0	0.5	4309