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. 2023 Nov 20;13(11):1166. doi: 10.3390/metabo13111166

Table 1.

Microbiota-derived tryptophan metabolites and gut microbiota (↑ represents an increase, ↓ represents a decrease).

Tryptophan
Metabolism
Producers Diet
Influence
Impact on
Metabolism
Impact on Microbes Reference
Indole Bacteroides thetaiotaomicron High-fat diet Indole
Production↓
Bacteroides spp.↓
Escheichia coli
Clostridium
[11,31,32]
Bacteroides ovatus
Clostridium limosum
Clostridium bifermentans
Clostridium malenomenatum
Clostridium lentoputrescens
Clostridium tetani
Clostridium tetanomorphum
Enterococcus faecalis
Escheichia coli
Fusobacterium nucleatum
Haemophilus influenza
Proteus vulgaris
Paracolobactrumcoliforme
Salmonella enterica
…for more see [33]
Indole-3-acetic acid (IAA) Bacteroides thetaiotaomicron High-fat diet IAA
Production↓
Bifidobacterium spp.↓
Bacteroides
Bifidobacterium adolescentis
[31,34,35,36,37,38]
Bacteroides ovatus
Bacteroides fragilis
Bifidobacterium adolescentis
Bifidobacterium pseudolongum
Clostridium difficile
Clostridium lituseburense High-fiber diet IAA
Production↑
Bifidobacteriumadolescentis
Clostridium difficile
Clostridium sporogenes
Escherichia coli
Eubacterium hallii
Eubacterium cylindroides
…for more see [39]
Indole-3-acrylic acid (IA) Clostridium sporogenes High-fiber diet IA
production ↑
Parabacteroides distasonis [40,41]
Peptostreptococcusrussellii
Peptostreptococcusanaerobius
Peptostreptococcusstomatis
Parabacteroides distasonis
…for more see [42]
Indole-3-propionic acid (IPA) Clostridium sporogenes High-fat diet IPA
Production↓
Clostridiumsporogenes [43,44,45,46,47,48,49,50]
Clostridium caloritolerans
Clostridium botulinum High-fiber diet IPA
Production↑
Clostridium
Bifidobacterium
Lactobacillus
Peptostreptococcus
Peptostreptococcusasaccharolyticus
Peptostreptococcusrussellii
PeptostreptococcusanaerobiusCC14N
Peptostreptococcusstomatis Ketogenic diet IPA
Production↓
Lactobacillus murinus
…for more see [51]
Indole-3-lactic acid (ILA) Anaerostipeshadrus High-fat diet ILA
Production↓
Eubacterium
Eubacterium rectale
Anaerostipescaccae
Bifidobacterium adolescentis
[37,52]
Anaerostipescaccae
Bacteroides thetaiotaomicron
Bacteroides eggerthii
Bacteroides ovatus
Bifidobacterium adolescentis
Bifidobacterium bifidum
Bifidobacterium pseudolongum
Clostridium bartlettii
Clostridium sporogenes
Escherichia coli High-fiber diet ILA
Production↑
Lactobacillus
Megamonas
Eubacterium rectale
Eubacterium cylindroides
Faecalibacteriumprausnitzii
Lactobacillus murinus
Lactobacillus paracasei
Lactobacillus reuteri
Megamonas hypermegale
… for more see [53]
Indole-3-aldehyde(IAld) Lactobacillus johnsonii High-fiber diet IAId
Production↑
Lactobacillus [54]
Lactobacillusreuteri
Lactobacillusacidophilus
Lactobacillusgallinarum
… for more see [30]
Indole-3-acetaldehyde (IAAld) Escherichia coli / / / [55]
Tryptamine Firmicutes C. sporogenes High-fat diet Tryptamine↓ Bacteroides
Escheichia coli
[52,56]
Clostridium sporogenes
Escherichia. coli
Ruminococcusgnavus
Bacteroides
3-methylindole (skatole) Bacteroides thetaiotaomicron High-fat diet complex
manner
/ [57,58]
Butyrivibriofibrisolvens
Clostridium bartlettii
Clostridium drakei
Eubacterium rectale
Megamonas hypermegale
Parabacteroides distasonis
… for more see [57]