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. 2023 Oct 17;10(11):uhad211. doi: 10.1093/hr/uhad211

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© The Author(s) 2023. Published by Oxford University Press on behalf of Nanjing Agricultural University.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Phylogenetic tree displaying NB domains of Innovator NLRs following assembly of SMRT-RenSeq reads. Expanded are the clades containing NRCs, Rpi-R1, Rpi-R2-like, Rpi-R3a, and Rpi-R3b. Collapsed clades either consist of automatic predictions from NLR-Annotator or of NLR clades not investigated in this study. Highlighted are the identified benchmark genes and candidates from each association with F1 = 1. The NB containing proteins APAF1 from Homo sapiens and CED4 from Caenorhabditis elegans act as outgroups. The tree scale indicates substitutions/site.