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. 2023 Nov 15;14:1261137. doi: 10.3389/fmicb.2023.1261137

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Copyright © 2023 Fujita, Ushio, Suzuki, Abe, Yamamichi, Okazaki, Canarini, Hayashi, Fukushima, Fukuda, Kiers and Toju.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Metagenomic niche space. (A) Distributions of MAGs within metagenomic niche space. Based on dissimilarity in gene repertoires, microbial MAGs that appeared in the time-series of the target microcosm were plotted on the three-dimensional space defined by the principal coordinate analysis (PCoA) of 6,999 genes. (B) Changes in the distributions of microbial MAGs within niche space. At each time point, detected MAGs (relative abundance >0.1%) were plotted on the space defined in the multivariate analysis in the in the panel (A).