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. 2023 Nov 10;63(22):7239–7257. doi: 10.1021/acs.jcim.3c00950

Table 2. Confusion Matrix and Three Types of Errors of CatBoost, XGBoost, and LightGBM on the Test Set of Benchmark Data Set.

model name TP TN FP FN ER FPR FNR
CatBoost 7339 (51.35%) 5516 (38.60%) 839 (5.87%) 598 (4.18%) 0.0587 0.1320 0.0753
XGBoost 7242 (50.67%) 5675 (39.71%) 680 (4.76%) 695 (4.86%) 0.0476 0.1070 0.0876
LightGBM 7302 (51.09%) 5513 (38.57%) 842 (5.89%) 635 (4.44%) 0.0589 0.1325 0.0800