TABLE 2.
Oligonucleotide primers used in this study
| Gene and primer | Nucleotide sequence | Source or reference |
|---|---|---|
| 16S rRNA gene | ||
| cj16S1 | 5′-GAGAGGCAGATGGAATTG-3′ | This study |
| cj16S2 | 5′-CCTACCTCCTATACCTGG-3′ | This study |
| cmeB | This study | |
| cmeB-1 | 5′-CCTACCTCCTATACCTGG-3′ | This study |
| cmeB-2 | 5′-TTGAACTTGTGCCGCTGG-3′ | |
| cmeF | ||
| cmeF-1 | 5′-GCACTAATGCACGCATTG-3′ | This study |
| cmeF-2 | 5′-TGCACCGCTCCTAAGGAA-3′ | This study |
| cmeF-a | 5′-TTATCCTAGCCACTCTTG-3′ | This study |
| cmeF-b | 5′-CCTATAGAAGCTCCGCCA-3′ | This study |
| cmeF-d | 5′-CGC(AGATCT)ATGCGTGCATTAGTGCCT-3′ | This study |
| cmeF-c | 5′-CGC(AGATCT)TTAGCGTAGGAAGCATGG-3′ | This study |
| gyrA | ||
| cjgyrA-1 | 5′-GCCTGACGCAAGAGATGGTT-3′ | 27 |
| cjgyrA-2 | 5′-TCAGTATAACGCATCGCAGC-3′ | 27 |
| gyrB | ||
| cjgyrB-1 | 5′-ATGGCAGCTAGAGGAAGAGA-3′ | 27 |
| cjgyrB-2 | 5′-GTGATCCATCAACATCCGCA-3′ | 27 |
| porA | ||
| porA-1 | 5′-TAATGCTGCTGATGGTGG-3′ | This study |
| porA-2 | 5′-AAGCACCTTCAAGTGTCC-3′ | This study |