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. Author manuscript; available in PMC: 2023 Nov 29.
Published in final edited form as: Infect Genet Evol. 2020 Dec 13;90:104677. doi: 10.1016/j.meegid.2020.104677

Table 2:

Number of non-B HIV-1 transmissions by subtype/circulating recombinant form (CRF), classified as local transmissions or inward migrations (or left unclassified) based on phylogenies of viral sequences collected in San Francisco from 2000 to 2016.

Subtype/CRF
Transmission Type A1 C D G CRF01_AE CRF02_AG CRF07_BC Total
Local transmission 0 7 0 1 11 3 5 27
Inward migration 10 30 4 4 39 15 6 108
Unclassified transmission 0 3 0 0 7 1 0 11
Total 10 40 4 5 57 19 11 146