TABLE 1.
List of primers used in this study
| Gene | Forward (5′-3′) | Reverse (5′-3′) | Application |
|---|---|---|---|
| RTAgb | ACACTGTACCAGCTGCACCA | GAAGTTAACGCAGGCACAGAC | RT-qPCR |
| ORF36 | ATTGCCAACGACCTGATGCA | ACTCCAGTCCAGCTGCAGCA | RT-qPCR |
| ORF56 | CACAGATTCCCGTCAATACAAA | GTATCTTCAGTAGGCGGCAGAG | RT-qPCR |
| ORF25gb | ACAGTTTATGGCACGCATAGTG | GGTTCTCTGAATCTCGTCGTGT | RT-qPCR |
| ORF64 | CTTCCTCGAGGGCATCATATAC | TATACGGTGATGGACTTGATGG | RT-qPCR |
| ORF48 | CCACATCTTCATAGAGCACAT | ATTGCATCACCAGGGTATCCA | RT-qPCR |
| RTA (HRE1) | ATGTGCGCGTATCCGGGCAAGCA | ACACGCCCTGGCGATTTTGGGTA | CUT&RUN-qPCR |
| RTA (HRE2) | TCAGGAGAGTTAGGGACGTGCTG | ACAGCTGTCGTTCAGATGTACCA | CUT&RUN-qPCR |
| RTA (HRE3) | AAGGTATAGGGTCTTCTCAACGT | AGTTAGATACCCTGTCCGTCG | CUT&RUN-qPCR |
| ORF34 | CCTGGTACTCGACCAGTTGATCG | ACATACTTGCAGATGCGGTGTGT | CUT&RUN-qPCR |
| LANApr | GTTTATAAGTCAGCCGGACCAA | GATATAACTCCGCCCTCCACTA | ChIP-qPCR |
| RTApr (−0.6 kb) | AAGACACTGACCCACCAAGG | GGTGCCACCAATGTATGACC | ChIP-qPCR |
| K2pr | CATACGCAGCCAAGCTATCA | GCTAGCACAGCAAATTGAGA | ChIP-qPCR |
| ORF25pr | AGTTGTCGGTGTCTATCTGT | TGCAGAGCGATACGCAGACT | ChIP-qPCR |
| ORF11 | GGCACCCATACAGCTTCTACGA | CGTTTACTACTGCACACTGCA | qPCR |
| HS1 | TTCCTATTTGCCAAGGCAGT | CTCTTCAGCCATCCCAAGAC | qPCR |
| 18S | TTCGAACGTCTGCCCTATCAA | GATGTGGTAGCCGTTTCTCAGG | RT-qPCR |
| VEGF | TGCAGATTATGCGGATCAAACC | TGCATTCACATTTGTTGTGCTGTAG | RT-qPCR |