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[Preprint]. 2023 Nov 20:rs.3.rs-3509208. [Version 1] doi: 10.21203/rs.3.rs-3509208/v1

Extended Data Fig. 2: LVMi GWAS using BOLT-LMM and PLINK.

Extended Data Fig. 2:

GWAS using BOLT-LMM (a) and PLINK (b) identified associations with LVMi, of which the lead SNV rs3045696 showed the highest significance. This SNV rs3045696 was also identified as the top lead SNV by both BOLT-LMM and PLINK while other lead SNVs (labeled) were significant in either the BOLT-LMM GWAS or the PLINK GWAS but not both. The red dashed line denotes the genome-wide significance threshold (p < 5E-8). The two SNVs, rs3045696 and rs67172995, are also stably prioritized by lo-siRF as epistasis interactor variants. Details can be found in Extended Data 1.