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. 2023 Nov 15;14:1292618. doi: 10.3389/fmicb.2023.1292618

Table 2.

Parameter estimates for mechanism-based PD model.

Parameter Definition Units Estimate (%RSEa)
Pharmacokinetic parameters
CLD,PYO Distributional clearance of PYO2b mL/h 2.96 (20.2%)
CLD,215 Distributional clearance of E215b mL/h 3.66 (19.4%)
CLD,LUZ Distributional clearance of LUZ19b mL/h 2.42 (13.9%)
Bacterial-specific parameters
LGCFUMX System maximum capacityb log10 (CFU/mL) 9.69 (0.603%)
γ Shape parameter for logistic growthc 0.1 (FIXED)
LGINOC Starting inoculumb log10 (CFU/mL) 5.46 (1.64%)
MGTS Mean generation time for susceptible- or single phage-resistant subpopulationb min 23.1 (3.73%)
MGTR Mean generation time for double phage-resistant subpopulationb min 56.6 (4.36%)
Shared phage parameters
LGRr Log-transformed 1st order rate constant for adaptive resistance to all three phagesc log10 (1/h) −8.60 (0.694%)
LGEC50 Log-transformed concentration for virocells-induced resistance/collateral phage effectsc log10 (CFU/mL) 2 (FIXED)
hrst Shape parameter for virocells-induced effectsc 5 (FIXED)
LGKrev Log-transformed 1st order rate constant for reversion of resistant cells to susceptiblec log10 (1/h) −2.75 (3.52%)
PYO2-specific parameters
LGKpyo Log-transformed 2nd order rate constant for phage-bacteria bindingc log10 (mL/PFU/h) −9.64 (0.582%)
LGRpyo Log-transformed 1st order rate constant for single-phage adaptive resistancec log10 (1/h) −15 (FIXED)
τ pyo Mean transit time for virocells maturationb min 20.4 (21.2%)
N pyo PYO2 burst sizeb PFU/CFU 73.8 (25.1%)
E215-specific parameters
LGK215 Log-transformed 2nd order rate constant for phage-bacteria bindingc log10 (mL/PFU/h) −9.48 (0.0968%)
LGR 215 Log-transformed 1st order rate constant for single-phage adaptive resistancec log10 (1/h) −6.17 (7.56%)
τ 215 Mean transit time for virocells maturationb min 31.7 (13.6%)
N 215 PYO2 burst sizeb PFU/CFU 168 (12.5%)
Emax,EoL Maximum effect of E215 on LUZ19 adsorption ratec 4.46 (5.82%)
LUZ19-specific parameters
LGKluz Log-transformed 2nd order rate constant for phage-bacteria bindingc log10 (mL/PFU/h) −8.43 (0.0973%)
LGRluz Log-transformed 1st order rate constant for single-phage adaptive resistancec log10 (1/h) −5.68 (4.68%)
τ luz Mean transit time for virocells maturationb min 27.9 (8.69%)
N luz PYO2 burst sizeb PFU/CFU 83.0 (18.0%)
Emax,LoE Maximum effect of LUZ19 on E215 adsorption ratec 8.48 (13.3%)
Emax,LoP Maximum effect of LUZ19 on PYO2 adsorption ratec 1.41 (15.9%)
Residual variability
aPAO1 Constant residual variability for PAO1 log10 (CFU/mL) 0.83 (4.01%)
apyo2 Constant residual variability for PYO2 in the HFIM cartridge log10 (PFU/mL) 1.85 (7.90%)
apyo2,cent Constant residual variability for PYO2 in the central reservoir log10 (PFU/mL) 3.30 (6.94%)
aE215 Constant residual variability for E215 in the HFIM cartridge log10 (PFU/mL) 2.34 (6.57%)
aE215,cent Constant residual variability for E215in the central reservoir log10 (PFU/mL) 2.33 (6.80%)
aLUZ19 Constant residual variability for LUZ19 in the HFIM cartridge log10 (PFU/mL) 1.67 (5.61%)
aLUZ19,cent Constant residual variability for LUZ19 in the central reservoir log10 (PFU/mL) 2.17 (5.39%)
a

RSE% – residual standard error percent.

b

IIV fixed to ω = 0.05.

c

IIV fixed to ω = 0.