Table 3.
Genes of Trollius plastome.
| Function of genes | Group of genes | Name of genes |
|---|---|---|
| Photosynthesis | ATP synthase | atpA, atpB (1), atpE, atpF (1), atpH, atpI |
| NADH dehydrogenase | ndhA (1), ndhB *, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK | |
| cytochrome c synthesis | ccsA | |
| Assembly/stability of photosystem I | ycf3 (2), ycf4 | |
| photosystem I | psaA, psaB, psaC, psaI, psaJ | |
| photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
| cytochrome b/f complex | petA, petB (1), petD (1), petG, petL, petN | |
| Rubisco | rbcL | |
| Self-replication | ribosomal proteins | rps2, rps3, rps4, rps7 *, rps8, rps11, rps12 * (1), rps14, rps15, rps16 (1), rps18, rps19, rpl2 *(1), rpl14, rpl16 (1), rpl20, rpl22, rpl23 *, rpl32, rpl33, rpl36 |
| transcription | rpoA, rpoB, rpoC1 (1), rpoC2 | |
| translation initiation | infA | |
| Ribosomal RNAs | rrn5 *, rrn4.5 *, rrn16 *, rrn23 * | |
| Transfer RNAs | trnA-UGC *(1), trnC-GCA, trnD-GUC, trnE-UU, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCC (1), trnH-GUG, trnI-CAU *, trnI-GAU * (1), trnK-UUU (1), trnL-CAA *, trnL-UAA, trnL-UAG, trnM-CAU, trnN-GUU *, trnP-UGG, trnQ-UUG, trnR-ACG *, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC *, trnV-UAC (1), trnW-CCA, trnY-GUA | |
| Other genes | RNA processing | matK |
| carbon metabolism | cemA | |
| Fatty acid synthesis | accD | |
| proteolysis | clpP (2) | |
| Unknown function | conserved reading frames | ycf1, ycf2 * |
(1) Gene with one intron;
(2) Gene with two introns;
* Number of copies of multi-copy genes.