Table 3.
The association between coat color and polymorphic loci of MC1R gene
| Site | Genotype | Cross between Berkshire and Licha black pig | Lulai black pig | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Black | Spotted | χ 2 | df | P value | Black | Spotted | P value | ||
| A/A | 52 | 0 | 31 | 0 | |||||
| c.51G > A | A/G | 30 | 0 | 95.14 | 2 | 2.19E-21 | 12 | 0 | 5.84E-07 |
| G/G | 8 | 37 | 0 | 5 | |||||
| --/-- | 60 | 0 | 31 | 0 | |||||
| c.67_68insCC | CC/-- | 30 | 0 | 127 | 2 | 2.64E-28 | 12 | 0 | 5.84E-07 |
| CC/CC | 0 | 37 | 0 | 5 | |||||
| A/A | 52 | 0 | 31 | 0 | |||||
| c.283G > A | A/G | 30 | 0 | 95.14 | 2 | 2.19E-21 | 12 | 0 | 5.84E-07 |
| G/G | 8 | 37 | 0 | 5 | |||||
| C/C | 52 | 0 | 31 | 0 | |||||
| c.305T > C | C/T | 30 | 0 | 95.14 | 2 | 2.19E-21 | 12 | 0 | 5.84E-07 |
| T/T | 8 | 37 | 0 | 5 | |||||
| C/C | 52 | 0 | 31 | 0 | |||||
| c.363T > C | C/T | 30 | 0 | 95.14 | 2 | 2.19E-21 | 12 | 0 | 5.84E-07 |
| T/T | 8 | 37 | 0 | 5 | |||||
| A/A | 1 | 0 | 0 | 0 | |||||
| c.364G > A | A/G | 22 | 0 | 0.000289 | 1 | 0 | 1.000 | ||
| G/G | 67 | 37 | 42 | 5 | |||||
| A/A | 8 | 37 | 0 | 5 | |||||
| c.370G > A | A/G | 30 | 0 | 95.14 | 2 | 2.19E-21 | 12 | 0 | 5.84E-07 |
| G/G | 52 | 0 | 31 | 0 | |||||
| A/A | 52 | 0 | 31 | 0 | |||||
| c.729G > A | A/G | 30 | 0 | 95.14 | 2 | 2.19E-21 | 12 | 0 | 5.84E-07 |
| G/G | 8 | 37 | 0 | 5 | |||||
Note: P values without chi-square value and degree of freedom are from Fisher exact test