Table 1.

List of mutation patterns with four cells $\{A,B,C,D\}$ that can be generated by introducing false positives and false negatives to pattern #12 ($G_{\ast ,j}=1100$) and pattern #3 ($G_{\ast ,j}=0011$) as well as their probabilities under the $\mathtt{UE}$ model

The red values indicate a false positive introduced to $G_{\ast ,j}$ by flipping 0 to 1. The blue values indicate a false negative introduced to $G_{\ast ,j}$ by flipping 1 to 0. Similar tables for the other 14 patterns are provided in Additional file 1