TABLE 1.
Sequence analysis of SecA fragmentsa
| SecA fragment (kDa) | N-terminal sequence |
|---|---|
| Generated in the presence of membrane | |
| Extracted from membrane | |
| 66 | 14NDRT |
| 48 | 361EGVQIQNENQ |
| 36 | 1MLIKLLtKVF |
| 9vFGSRNDRTL | |
| 14nDRTLRRMRK | |
| 31 | 361EGVQIQNENQ |
| 575SGRQGdaGS | |
| s29 | 361EGVQIQNENQ |
| Recovered from supernatant | |
| 66 | 9VFGSRNDRTL |
| 14NDRTLRRMRK | |
| 36 | 9VFGSRNDRTL |
| 14NDRTLRRMRK | |
| s29 | 361EGVQIQNENQ |
| Generated in the absence of membrane | |
| In buffer containing ATP and precursor | |
| 66 | 9VFGSRNDRTL |
| 14NDRTLRRMRK | |
| 36 | 9VFGSRNDRTL |
| 14NDRTLRRMRK | |
| s29 | 361EGVQIQNENQ |
| In buffer with low trypsin | |
| 66 | 9VFGSRNDRTL |
| 50 | 9VFGsRNDRTL |
| 36 | 104TGEGKTLTAT |
| 30 | 644QLLEQQDVA |
SecA fragments were generated in the presence of membranes as described in Materials and Methods and were subjected to peptide-sequencing analysis. Soluble SecA (1 mg/ml) was digested with trypsin on ice for 15 min in buffer in the presence of energy source and proOmpA (1 mg of trypsin/ml) or in the absence of energy source and proOmpA (20 μg of trypsin/ml). The resulting SecA fragments were then analyzed in the same manner as the SecA fragments generated in the presence of membranes. Identified SecA sequences are shown in single-letter code. Uppercase letters represent amino acids of the analyzed sequences which match the known SecA sequence (31), whereas lowercase letters represent unconfirmed residues.