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. 2023 Dec 1;6:1221. doi: 10.1038/s42003-023-05610-7

Fig. 3. Structure modeling results on a PDI family member protein, ERdj5 (PDB ID: 3APO).

Fig. 3

Predicted models by AlphaFold2 (green) (a) and DeepAssembly (pink) (b) are shown along with the experimental structure (blue cartoon and surface). The side chains of the redox-active sites in Trx3 and Trx4 of the experimental structure are shown in orange spheres (circled in red). The side chains of the redox-active sites in Trx3 and Trx4 of the AlphaFold2 model are shown in pink spheres (circled in black). The Trx-containing plain is shown in red line.