Table 4.
Number of the consequences and impact of single-nucleotide mutations of the MA lines in three treatment regimes.
| Young T1 | Peak T2 | Old T5 | ||
|---|---|---|---|---|
| Consequence | downstream_gene_variant | 18 | 4 | 18 |
| intergenic_variant | 0 | 0 | 1 | |
| intron_variant | 2 | 1 | 2 | |
| missense_variant | 3 | 2 | 4 | |
| splice_donor_variant | 1 | 0 | 0 | |
| stop_gained | 1 | 0 | 0 | |
| synonymous_variant | 1 | 1 | 6 | |
| upstream_gene_variant | 19 | 3 | 16 | |
| Impact | HIGH | 2 | 0 | 0 |
| LOW | 1 | 1 | 6 | |
| MODERATE | 3 | 2 | 4 | |
| MODIFIER | 39 | 8 | 37 |