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. 2023 Dec 2;23:611. doi: 10.1186/s12870-023-04604-1

Table 1.

Detailed information regarding VviGATA transcription factors in grapevine

Gene name VCost. v3 ID Chromosome Protein length Molecular Weight Isoelectric points Instability index Aliphatic index Grand average of hydropathicity Subcellular localization
VviGATA1 Vitvi05g00938.t01 Chr5: 11488096–11490172 (+) 251 28,207.36 8.93 71.75 55.50 -0.884 Nucleu
VviGATA2 Vitvi08g01831.t01 Chr8: 21037320–21039073 (+) 299 33,490.24 5.28 65.26 62.88 -0.877 Nucleu
VviGATA4 Vitvi15g00636.t01 Chr15: 13505444–13506841 (+) 270 29,892.01 6.71 57.84 57.07 -0.753 Nucleu
VviGATA5a Vitvi03g00037.t01 Chr3: 452645–454156 (+) 317 34,581.26 5.49 71.43 57.54 -0.666 Nucleu
VviGATA5b Vitvi04g01410.t01 Chr4: 19834595–19836218 (+) 338 36,840.01 5.67 64.11 55.41 -0.696 Nucleu
VviGATA7 Vitvi14g02998.t01 Chr14: 26715212–26732353 (-) 367 40,974.27 7.85 48.86 71.74 -0.711 Nucleu
VviGATA8a Vitvi06g00271.t01 Chr6: 3427832–3433983 (+) 464 50,520.96 8.14 52.16 62.26 -0.574 Nucleu
VviGATA8b Vitvi13g00614.t01 Chr13: 5861656–5865169 (-) 340 36,536.18 6.46 66.94 60.82 -0.539 Nucleu
VviGATA9a Vitvi04g00289.t01 Chr4: 2729898–2731726 (+) 342 37,926.31 5.85 50.05 61.90 -0.650 Nucleu
VviGATA9b Vitvi09g00311.t01 Chr9: 3439027–3440508 (+) 329 36,379.32 5.87 49.43 55.14 -0.708 Nucleu
VviGATA13 Vitvi06g01610.t01 Chr6: 1526246–1528992 (+) 171 19,120.16 7.64 66.63 40.00 -1.101 Nucleu
VviGATA15 Vitvi07g02214.t01 Chr7: 4011736–4013050 (+) 140 15,404.86 10.20 67.71 73.93 -0.642 Nucleu
VviGATA16a Vitvi05g00077.t01 Chr5: 747538–748871 (+) 153 16,668.76 9.76 64.31 61.90 -0.918 Nucleu
VviGATA16b Vitvi14g00123.t01 Chr14: 1203167–1204479 (+) 125 13,989.38 9.76 64.59 63.20 -0.682 Nucleu
VviGATA18 Vitvi04g01299.t01 Chr4: 18788409–18789713 (+) 240 26,788.04 6.40 61.46 56.58 -0.464 Extracellular
VviGATA21 Vitvi11g00180.t01 Chr11: 1817856–1819363 (+) 310 34,297.71 9.31 58.49 57.68 -0.749 Nucleu
VviGATA22 Vitvi04g00111.t01 Chr4: 1062734–1064236 (+) 306 34,091.42 8.76 64.04 49.15 -0.823 Nucleu
VviGATA24a Vitvi03g01002.t01 Chr3: 14536380–14549507 (+) 302 32,126.58 5.47 44.48 65.86 -0.547 Chloroplast
VviGATA24b Vitvi03g01766.t01 Chr3: 14596771–14644542 (+) 387 42,646.46 4.86 40.83 63.44 -0.685 Nucleu
VviGATA24c Vitvi09g01352.t01 Chr9: 20973834–20989595 (-) 299 32,677.24 6.19 37.61 57.09 -0.831 Nucleu
VviGATA24d Vitvi18g00538.t01 Chr18: 6060270–6094659 (+) 368 40,224.67 4.78 45.79 71.55 -0.594 Nucleu
VviGATA25 Vitvi18g00537.t01 Chr18: 6040085–6058225 (+) 294 32,429.73 5.82 47.89 61.02 -0.761 Nucleu
VviGATA26 Vitvi12g01002.t01 Chr12: 13444491–13447481 (+) 735 84,601.97 9.46 38.93 101.69 0.065 Plastids