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. 2023 Nov 16;13:1275954. doi: 10.3389/fcimb.2023.1275954

Table 4.

Increased proteins in macrophages infected with Paracoccidioides brasiliensis yeast cells involved in stress response.

Accession number1 Protein description and biological process2 Score3 Fold change4
Stress response
P07203 Glutathione peroxidase 1 4743.71 2.225
Q9Y2Q3 Glutathione S-transferase kappa 1 843.45 *
P09211 Glutathione S-transferase P 22608.57 1.682
K7EN27 Maillard deglycase (Fragment) 13395.05 2.117
K7ELW0 Parkinson disease protein 7 17649.65 3.706
P32119 Peroxiredoxin-2 1915.38 1.896

1 Accession number of matched protein from Homo sapiens’ macrophages Uniprot database (https://www.uniprot.org/).

2 Proteins annotation from Homo sapiens’ database or by homology in NCBI database (http://www.ncbi.nlm.nih.gov/) and biological process according to the classification of KEGG (https://www.genome.jp/kegg/), UniProt database (https://www.uniprot.org/), NCBI database (http://www.ncbi.nlm.nih.gov/) and CORUM database (http://mips.helmholtz-muenchen.de/corum/).

3 PLGS score is the result of different mathematical models for peptide and fragment assign prediction.

4 Fold-change values were obtained by dividing the values of protein abundance (in fmol) from macrophages during infection by live PB by the abundance in the uninfected macrophages. Proteins with a minimum fold-change of 50% (≥ 1.5) were considered to be upregulated.

* Proteins detected only in infected macrophages.

A fold equal to or higher than 1.5 was considered.